Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq5912 203 1e-48 >seq5912 Length=19793 Score = 203 bits (224), Expect = 1e-48 Identities = 606/920 (66%), Gaps = 29/920 (3%) Strand=Plus/Plus Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61 |||| ||||| | || || || || ||||| || ||||||||| | ||| | | || Sbjct 12225 GCAGGTCAAGTCGAAAATTCTAGAATCTATGGCGGAGTGGACGGAGTTCTTCTCTAACAA 12284 Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121 ||| ||| | ||||||||||||||||| || |||| | ||||| |||||| ||| Sbjct 12285 CCCGGATTTCGGCATCATGGAGCAGGCTTACATGAAATTGAAGACGCAAAGTACGTAACT 12344 Query 122 TCAACTCTGGTTC-GTTG-GGAGCACTGACCAACGTGT-TGTAGACCCTAACCTGCGACC 178 || || ||| | ||| || || |||||| | || | |||| || | || | || Sbjct 12345 ATAAGTC-GGTACTGTTCTGGCGCCCTGACCGAAGTCCATCTAGATCCCACTCTTCATCC 12403 Query 179 TCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGA 238 || ||||| ||| ||| || || || || ||||| || ||||| ||||| || Sbjct 12404 CCCTTCGAAGCCTACGAAACGGCAAATTACTGAGGTTGACCGGCAAAAGGAGGAGGAAGA 12463 Query 239 GCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATC-CGCCGCCA 297 || ||||||||||| || || || | || || | ||| | | | | | Sbjct 12464 ACTGCAGATGGCGCTTGCTCTTTCGATAAAAGACAAACCCTCCGTAAAACCTCTAAACGA 12523 Query 298 GGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGCCCCGGAACAAG-AGCAGCAT 356 | ||| | ||||| | ||| | || | ||| | |||| ||| | | Sbjct 12524 GCCTCAAGCTGCCGCTACGTCTAGCGCAGAGTCACTTAGCCA-GCCACAACCAGCTCCCT 12582 Query 357 CA-AGC-TATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACG 414 || ||| |||| | ||||||| || || || || || || || || | || || | | Sbjct 12583 CACAGCCTATTCCTCCTGGAACAACTGCGGCAACTGTTTCTCGGGTGAGAGCACTGTTTG 12642 Query 415 ACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTC 474 | || ||| || || ||||| ||| | ||||| ||||| || || ||||| |||| Sbjct 12643 ATTTTCAGCCTTCTGAGCCCGGGGAGCTTCAATTCCGGAAAGGTGATATCATTGCCGTTC 12702 Query 475 TCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCC 534 | |||||||| || || || ||||||||||| || || || || ||||| || || |||| Sbjct 12703 TGGAGTCTGTATATAAAGATTGGTGGAAGGGCTCGCTCCGAGGGCAGACGGGAATTTTCC 12762 Query 535 CCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTC 594 | ||||| ||||| |||||||| | ||||| || ||| || || || | || || | Sbjct 12763 CTCTCAATTATGTAGAGAAGCTACCAGATCCAACTCCGGAAGATCTGCAGCGCGAGGCAC 12822 Query 595 AGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGA 654 | |||||||| ||||| |||| | |||| || || || ||||||||| | | || ||| Sbjct 12823 AAATGGAGGCAGAAGTATTTGGGCAGATTAAAAATGTTGAGAAGCTGTTGACCCTTTTGA 12882 Query 655 GCACT---AGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACA 711 ||||| || ||| | | | ||||| ||||| || || | | || ||| Sbjct 12883 GCACTAGCAGCTCGGAACTTAATGTTCAAGACAACGAGGAAATAACAGCCTTATATCACT 12942 Query 712 AGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGG 771 || | | || | ||||| | ||||| || || || || ||||| || ||||| | Sbjct 12943 CCACGTTAGCTATCAGACCGAAACTCATCGAACTGATAGGGAAATATTCACAGAAGAAAG 13002 Query 772 GTAAGTGGAATCTTTTACGCGAATT-TGTGTG---TTGGCCACTG---ATCGTGTTCC-A 823 ||| | || | ||||| ||||| | ||| || || | || | Sbjct 13003 GTAGG---------TTCCAAGAATTCCGTGTGGCATGAACCATTGGCTCACGCGAACCTA 13053 Query 824 GATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTC 883 ||||| || || || ||||| || |||||||| || ||||| | || || ||| | ||| Sbjct 13054 GATGAATTTACACAACTCAATGAAAAGTTCATTAAAGCACGGAGGGATTATGAAGCGCTC 13113 Query 884 CTTGAAGCCTCGATGTCGCA 903 || || || || ||||| || Sbjct 13114 CTAGAGGCTTCAATGTCTCA 13133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944087908650