Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq73 318 2e-83 >seq73 Length=4627324 Score = 318 bits (352), Expect = 2e-83 Identities = 420/584 (72%), Gaps = 20/584 (3%) Strand=Plus/Minus Query 364 TTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGC 423 || |||| || || || ||||| ||||| || || ||||| || || || ||||| || Sbjct 294231 TTCCATCAGGGACGACGGCAGCCACCGTTTCTCGAGTTCGAGCTCTGTATGACTTTCAGC 294172 Query 424 CCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTG 483 | || || ||||| || | |||||||| || ||| |||| || |||||||| |||| Sbjct 294171 CTTCCGAGCCCGGAGAACTCCAGTTCCGCAAGGGTGACGTTATCGCAGTTCTCGAATCTG 294112 Query 484 TGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACT 543 | ||||| || |||||||| |||||||||||||| || ||||| |||||||| || |||| Sbjct 294111 TTTACAAAGATTGGTGGAAAGGTTCTCTGCGTGGCCAAACCGGAATCTTCCCTCTGAACT 294052 Query 544 ATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGG 603 |||||||||| || ||||| ||| | ||||| ||| | | ||||||||||||||| | Sbjct 294051 ATGTCGAGAAACTATCAGATCCAACCCAAGAGGAACTCCAAAAAGAAGCTCAGATGGAAG 293992 Query 604 CGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC---TA 660 | ||||| || ||||| || || || |||||||||||| | | || ||||||| || Sbjct 293991 CTGAAGTTTTCGCGGAAATAAAAAATGTGGAGAAGCTGTTGACACTTTTGAGCACCAGTA 293932 Query 661 GTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGT 720 ||||| ||| ||| || || || ||||| | || ||||| |||| || Sbjct 293931 GTTCGGAATTAAACGTGCAGGAGAACGACGAAATCACAACACTATACCATTCGACACTGG 293872 Query 721 CGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG---- 776 | ||||| ||||| | || ||| | || || || || ||||| || || |||||| Sbjct 293871 CCATACGACCGAAACTTATTGAGTTGATCGGTAAATACTCGCAGAAAAAAGGTAAGCATT 293812 Query 777 ------TGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATT 830 | ||| | || || | || | || |||| | | || |||||| | Sbjct 293811 TTCGGTTTGAAGCATTCACCCAAAAAGCTTTG-------CTGACCTTCTTGAAGATGACT 293759 Query 831 TCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAG 890 ||||||| || || || ||||||||||| || || | ||||||||| || | ||||| | Sbjct 293758 TCACGCAACTTAATGAAAAGTTCATCAAAGCTCGAAGAGACTACGAATCCTTGCTTGAGG 293699 Query 891 CCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCGTCAACCC 934 |||||||| | || ||||||||||| |||||| || |||||| Sbjct 293698 CCTCGATGGCTCATCCAGCGCAGCCGCACTACGGACGGCAACCC 293655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945581164260