Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq787 304 4e-79
>seq787
Length=4642
Score = 304 bits (336), Expect = 4e-79
Identities = 406/560 (73%), Gaps = 21/560 (4%)
Strand=Plus/Plus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || || ||||| || || || || ||||| ||||| || ||||| |||||
Sbjct 2182 TCAGGGACAACGGCAGCCACTGTTTCTCGTGTTCGAGCCCTGTATGACTTTCAACCCTCC 2241
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| ||||| || | |||||||| || ||| |||| || ||||| || ||||| |||
Sbjct 2242 GAGCCCGGAGAACTCCAGTTCCGCAAGGGGGACGTTATCGCAGTTCTGGAATCTGTTTAC 2301
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
|| || |||||||| |||||||||||||| || || || || || || | |||||||||
Sbjct 2302 AAAGATTGGTGGAAAGGTTCTCTGCGTGGCCAAACGGGAATATTTCCTTTAAACTATGTC 2361
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
||||| || ||||| ||| ||||||| ||||| ||||||||||||||||| || |||
Sbjct 2362 GAGAAACTATCAGATCCAACCCAGGAGGAACTCGAAAGAGAAGCTCAGATGGAAGCTGAA 2421
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG---CACTAGTTC- 664
|| || ||||| || || |||||||||||||| | | || |||| || ||||||
Sbjct 2422 GTTTTCGCGGAAATAAAAAACGTGGAGAAGCTTTTGACACTTTTGAGTACCAGTAGTTCA 2481
Query 665 GAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGAT 724
|| | ||| | ||| || || || ||||| | |||||||| ||| || | ||
Sbjct 2482 GAAT-TGAACGTTCAGGAAAACGACGAAATCACAACCCTGTACCATTCGACCTTGGCCAT 2540
Query 725 ACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG-------- 776
||||||||| | || || | ||||| || || ||||| ||||||||||||
Sbjct 2541 ACGGCCGAAACTTATTGAATTGATTGGTAAATACTCGCAGAAGAAGGGTAAGCATTTCAA 2600
Query 777 -TGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACG 835
||| | || || | | || ||| || ||| ||| |||||| ||||||
Sbjct 2601 TCCGAACCATTCACTCAA---GCAGTTTTGCTTAC--ATC--CTTCAAGATGACTTCACG 2653
Query 836 CAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCG 895
|| || || || ||||||||||| || || | ||||||||| || | ||||||||||||
Sbjct 2654 CAACTTAATGAAAAGTTCATCAAAGCTCGAAGAGACTACGAATCCTTGCTTGAAGCCTCG 2713
Query 896 ATGTCGCAACCAGCGCAGCC 915
||| | || |||||||||||
Sbjct 2714 ATGGCTCATCCAGCGCAGCC 2733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944824944180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |