Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq6 208 2e-50 >seq6 Length=3640113 Score = 208 bits (230), Expect = 2e-50 Identities = 245/328 (75%), Gaps = 5/328 (2%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || ||||| || || || || || || |||||||| || ||||| ||| || || ||| Sbjct 225320 GGCACCACGGCCGCCACGGTGTCGCGGGTTCGCGCGCTCTACGATTTCGTCCCGTCCGAA 225379 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| ||| ||| || || ||| | || || || |||||||| || |||||| Sbjct 225380 CCGGGCGAGCTGGAGTTCAAGAAGGGAGACGTCATCGCCGTGCTCGAGTCGGTCTACAAG 225439 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || || || || |||| || |||||||| |||||||| |||||| Sbjct 225440 GACTGGTGGCGCGGCTCGCTCAAGGGCAAGACGGGTATCTTCCCGCTCAACTACGTCGAG 225499 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||| |||||| ||| ||| ||||| || | || || ||||||||||| || ||| Sbjct 225500 AAGCTGACGGATCCGACCCCGGACGAGCTGCAGCGCGAGGCCCAGATGGAGGCCGAGGTC 225559 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCA---CTAGTTCGAGT 668 ||| | |||||||||||||| ||||||||| | | ||| |||||| ||| || | Sbjct 225560 TTTTCCGAGATCAAGAACGTCGAGAAGCTGTTGACGCTGTTGAGCACGTCTAACACG-GC 225618 Query 669 GCCGACGCTAG-GGACAATGAGGAGATC 695 ||||| | || ||| || ||||||||| Sbjct 225619 GCCGAGGGAAGAGGATAACGAGGAGATC 225646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945597035115