Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq29 185 3e-43
>seq29
Length=143628
Score = 185 bits (204), Expect = 3e-43
Identities = 213/287 (74%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| || || || |||||||| ||||| || |||||| | ||||||||| ||| || ||
Sbjct 108209 GGCACTACGGCTGCTACCGTATCCCGTGTCCGCGCCTTATACGACTTCGTGCCGTCTGAG 108268
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
||||||||||| || || || ||||||||||| || || || ||||| | ||||
Sbjct 108269 GACGGCGAGTTGGAGTTTAAGAAGGGTGACATTATTGCTGTACTGGAATCTGTCTTCAAG 108328
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| || ||| ||||||| ||||| || ||||| || |||||||||||||||
Sbjct 108329 GACTGGTGGCGCGGATCTTTGCGTGGCCAGACTGGAATCTTTCCACTCAACTATGTCGAG 108388
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||||| || || || ||||| || || | ||||| || ||||| || |||
Sbjct 108389 AAGCTCACAGACCCCACGCCCGAGGAACTTCAGCGCGAAGCCATCATCGAGGCTGAGGTC 108448
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
||| | |||||| ||||| |||||||| | || |||| |||||
Sbjct 108449 TTTTCTGAGATCCGTAACGTCGAGAAGCTCTTGACTTTGCTAAGCAC 108495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945446698005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |