Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20bromicola_20[genbank_20GCA_5F001008065.1_202015-05-15] 2,512 sequences; 38,775,191 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq37 188 2e-44 >seq37 Length=228953 Score = 188 bits (208), Expect = 2e-44 Identities = 214/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || || || || || ||| ||| || |||||| | ||||||||| ||| || | Sbjct 99462 CTGGCACGACTGCCGCGACTGTCAGCCGAGTGCGCGCCTTGTACGACTTCGTGCCGTCCG 99403 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | | || ||| | | ||| || |||||| | ||||| || || ||| |||||||| Sbjct 99402 AGGCTGGTGAGCTCGAATTCAAAAAGGGCGACGTCATTGCTGTGCTAGAGAGTGTGTACA 99343 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 |||| |||||| |||||| || || |||| ||||||||||| || ||||| || | Sbjct 99342 AGGATTGGTGGCGTGGTTCTTTGAAGGGCAAGACGGGCATCTTCCCGCTGAACTACGTGG 99283 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 ||||| || |||||| || || ||||| |||| || || ||||||||||| || | Sbjct 99282 AGAAGTTGACGGATCCCACGCCCGACGAGCTGCAGAGGGAGGCACAGATGGAGGCCGAGG 99223 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 | ||||| |||||||||||||| ||||||||||| |||| ||||| Sbjct 99222 TGTTTGCCGAGATCAAGAACGTCGAGAAGCTGCTGACTCTCTTGAGC 99176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945161894640