Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epichloe_20sylvatica_20[genbank_20GCA_5F001008265.1_202015-05-15] 36,463 sequences; 36,098,533 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq107 194 5e-46 >seq107 Length=32276 Score = 194 bits (214), Expect = 5e-46 Identities = 215/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || || || || |||||| ||| || |||||| | ||||||||| ||| || | Sbjct 1495 CTGGCACGACTGCCGCGACCGTCAGCCGAGTGCGCGCCTTGTACGACTTCGTGCCGTCCG 1436 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | |||| ||| | | ||| || |||||| | ||||| || || ||| |||||||| Sbjct 1435 AGGCCGGTGAGCTCGAGTTCAAAAAGGGCGACGTCATTGCCGTGCTAGAGAGTGTGTACA 1376 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 |||| |||||| ||||||||| | || ||| ||||||||||| || ||||| || | Sbjct 1375 AGGATTGGTGGCGTGGTTCTCTGAGGGGCAAGAGAGGCATCTTCCCGCTGAACTACGTGG 1316 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 ||||| || |||||| || || ||||| |||| || || | ||||||||| || | Sbjct 1315 AGAAGTTGACGGATCCCACGCCCGACGAGCTGCAGAGGGAGGCACGGATGGAGGCTGAGG 1256 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 | ||||| |||||||||||||| |||||||| || |||| ||||| Sbjct 1255 TGTTTGCCGAGATCAAGAACGTCGAGAAGCTACTGACTCTCTTGAGC 1209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15939240670485