Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Epicoccum_20sorghinum_20[genbank_20GCA_5F001879705.1_202016-11-17] 391 sequences; 33,420,179 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq320 441 2e-120 >seq320 Length=383359 Score = 441 bits (488), Expect = 2e-120 Identities = 683/974 (70%), Gaps = 65/974 (7%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||||| |||||||||||||| ||| || ||| | || |||||| | | |||| | Sbjct 227328 TCAAGGCCAAGATCCTCGAGCGCATGCAGGAGTGGTCCGACATGTTCTCGCGGGACCCAG 227269 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTG-TG---AT 122 | || ||||||||| || || || | | ||| ||| | || ||| ||| || || Sbjct 227268 ACCTCGGCATCATGCAGGGCGCATACAACAAGCTGAAGTCGCAGAGTACGTCATGGCCAT 227209 Query 123 CAACTCTGGTTCGTTGGGAGCACTG-----ACCAACGTGTTGT---AGACCCTAACCTGC 174 || || || | |||| || || ||| || |||||| | ||||| Sbjct 227208 GAAGCCTATGTC-TGAATAGCAATGGTCACACTAACATGACACGCCAGACCCCAGCCTGC 227150 Query 175 GACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGG 234 | | |||||||| || |||||||| |||||| | || | || |||||||||||||||| Sbjct 227149 GCGCCCCGTCGAAGCCGCAGAAGACACAGATCTCCGAAGCCGAGCGCCAGAAGGAAGAGG 227090 Query 235 AGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGA----AAGCGGGACCGAGCCATCC 290 ||||||| |||||||| ||||| | ||| | ||| ||| | | ||| || ||| Sbjct 227089 AGGAGCTGCAGATGGCCCTGGCCATGTCCATACGGGAGTCCAAGGGCG-CCGCCCCCTCC 227031 Query 291 GCCGCCAGGTCCAACCAGCCGCAAG------CAAAAGCCCCACAAC---AATCCGCCCCG 341 | |||| ||| ||| ||||||| ||| ||| | || || |||| | | Sbjct 227030 ACGGCCAAGTCGAACGCCCCGCAAGGCACGGCAACCGCCTCCCAGTCCGAACCCGCACAG 226971 Query 342 GAACAAGAGCAGCATCAAGCTATTGCATCT------------GGAACCACAGCAGCTACC 389 | ||| | ||| || || ||| | || || |||||||| ||| Sbjct 226970 GCACAGGCACAGGCACAGGCACAGGCACCGCCGCCACCACAGGGCACTACAGCAGCGACC 226911 Query 390 GTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTC 449 || || || || || ||| | | ||||||| ||| || || || || ||| || || Sbjct 226910 GTGTCGCGAGTCCGTGCCTTGTTCGACTTCCAGCCGTCTGAGCCGGGGGAGCTGCAGTTT 226851 Query 450 CGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCT 509 || |||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct 226850 AAGAAGGGCGACATCATCGCTGTGCTCGAGTCGGTGTACAAGGACTGGTGGAAGGGATCG 226791 Query 510 CTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACC 569 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| || || Sbjct 226790 CTGCGTGGACAGACGGGCATCTTCCCGCTCAACTATGTCGAGAAGCTGCAGGACCCCACA 226731 Query 570 AAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAAC 629 ||| ||||| ||| | || || ||||||||||| || || ||||| |||| |||| Sbjct 226730 CGGGAAGAGCTGGAGCGCGAGGCACAGATGGAGGCCGATGTGTTTGCCCAGATTCGGAAC 226671 Query 630 GTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCG-AGTGCCGACGCTA-----GGGAC 683 || ||||||||||| || ||||| ||||| || ||| | || || || | | ||| Sbjct 226670 GTCGAGAAGCTGCTTGCCCTGCTCAGCACAAGCTCGCAAGGCGGAGGCGATGTCCGTGAC 226611 Query 684 AATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAG 743 || ||||||||||| ||| |||||| ||| || | ||| |||||||| | |||||| Sbjct 226610 AACGAGGAGATCACAGAGCTCTACCACTCGACGCTGGCCATAAGGCCGAAGCTCATCGAG 226551 Query 744 CTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGT 803 ||||| |||||||| ||||| ||||||||| | | |||| || || ||| | Sbjct 226550 CTCATCGGCAAGTACTCGCAGAAGAAGGGTGCG-------TATTACCAGAGATTATGTAT 226498 Query 804 TGGCCACTGATC-------------GTGTTCCAGATGATTTCACGCAGCTCAACGAGAAG 850 | ||||||| || |||| || ||||| || || ||||||||| Sbjct 226497 AGAGTACTGATCATCCACTGACGAGCTGCATCAGACGACTTCACCCAACTGAACGAGAAG 226438 Query 851 TTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCG 910 |||||||| | ||||||||||||||| | ||||| |||||||| ||| | ||| | || Sbjct 226437 TTCATCAAAGGCCGCCGCGACTACGAATCGCTCCTCGAAGCCTCCATGACACAAGCTGCC 226378 Query 911 CAGCCCGGCTACGG 924 ||||| |||||||| Sbjct 226377 CAGCCAGGCTACGG 226364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945531807645