Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798795.1_202014-12-08] 6,350 sequences; 49,942,550 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3010 107 6e-20 >seq3010 Length=11765 Score = 107 bits (118), Expect = 6e-20 Identities = 204/295 (69%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 366 GCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTT-CACGCC 424 || ||||| || ||||| || ||||| || || || || || | || ||||| || || Sbjct 2802 GCGTCTGGGACGACAGCTGCAACCGTATCGCGAGTACGGGCATTGTATGACTTTCAAGCA 2861 Query 425 CTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGT 484 | || || | || || ||| ||| || || || || |||||||| || ||||| Sbjct 2862 A-CTGATCCTGATGAATTAAATTTTTCCAAGGGAGATATAATCGCGGTTCTTGAATCTGT 2920 Query 485 GTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTA 544 |||||||| ||||||||||| |||| || | || || ||||| || | ||||| Sbjct 2921 ATACAAGGATTGGTGGAAGGGACTTCTGAAGGGTCGAACTGGAATCTTTCCTTTGAACTA 2980 Query 545 TGTCGAGAAGCT-GCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGG 603 ||| || || || ||| || || || |||||||| ||||| || || | || | Sbjct 2981 TGTTGAAAAACTAGCA-GACCCAACGCCAGAGGAGCTAAGAAGAGAGGCGCAAGTAGAAG 3039 Query 604 CGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 | |||||||| || || || || || || |||||| | | | |||||||||| Sbjct 3040 CTGAAGTCTTCGCAGAAATTAAAAATGTCGAGAAGTTATTGACATTGCTGAGCAC 3094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944492528250