Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20calicioides_20[genbank_20GCA_5F001599795.1_202016-03-01] 37 sequences; 36,366,738 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2 251 2e-63 >seq2 Length=8083196 Score = 251 bits (278), Expect = 2e-63 Identities = 630/940 (67%), Gaps = 44/940 (5%) Strand=Plus/Plus Query 3 CAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAAC 62 ||| |||| | |||||||| ||||| |||| ||||| | | ||| ||| ||| Sbjct 5874602 CAGGTCAAATCCAAGATCCTGGAGCGAATGGAGCAATGGGCAAAAGAGTTTTCCAAGAAC 5874661 Query 63 CCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGAT 122 | || ||||| || ||||| ||||| |||||||| | ||| | |||||| || | Sbjct 5874662 ACAGAGCTTGGAATAATGGAACAGGCGTATATGAGATTGAAGGCGCAAAGTAAGTCGATT 5874721 Query 123 CAACT-CTGG------TTCGTTGG-GAGCACTGACCAACGTGTTGTAGACCCTAACCTGC 174 | || ||| | ||| ||| ||||| | ||| |||||| ||||| | Sbjct 5874722 CCTCTACTGCACAGCATCCGTACACGAGGCCTGACTTGTGGCTTGCAGACCCCAACCTCC 5874781 Query 175 GACCTCCGTCGAA--ACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGA 232 |||||| | || |||| || |||||||| | || || | || |||||||| Sbjct 5874782 AACCTCC--CCAAGCACCTGTCAAACAACAGATCACAGCCTACGATAGACAAAAGGAAGA 5874839 Query 233 GGAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAA-----GCGGGACCG---AG 284 |||||| ||||| ||||| || ||||||| || | || | || || || || Sbjct 5874840 GGAGGAACTACAAATGGCCCTCCAACTCTCCATCCAAGACAAATCTGCCGGCCCCTCAAG 5874899 Query 285 CCATCCG-CCGCCAGGTCCAACC-AGCCGCAAGCAAAAGCCCCA-CAACAATCCGCCCCG 341 || ||| ||| | ||| || || | ||| || | | ||||| | || | Sbjct 5874900 TCAACCGGCCGGCCC-TCCGGCCGAGTTGGCAGCCCAATCTTCGGCAACAG-CAGCAACA 5874957 Query 342 GAACAAGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTT 401 |||| | | || || | |||| || || || ||||| || ||||| | || Sbjct 5874958 CAACAGAATGTCCCCCACGCCGTGCCATCCGGCACAACGGCAGCGACGGTCTCAAGGGTG 5875017 Query 402 CGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGAC 461 || || || | |||||| ||| || |||||||| || ||| || ||||||||||| Sbjct 5875018 CGAGCACTCTTTGACTTCCAGCCGTCAGAACCCGGGGAATTGCAATTTCGCAAAGGCGAT 5875077 Query 462 ATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAG 521 | || || || ||||| || || ||||| || |||||||| || || || || || ||| Sbjct 5875078 GTCATCGCCGTCCTCGAATCGGTCTACAAAGATTGGTGGAAAGGCTCGCTCCGCGGGCAG 5875137 Query 522 ACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTC 581 || ||||| || || |||||||| |||||||| || || || || || ||| || | Sbjct 5875138 ACGGGCATATTTCCACTCAACTACGTCGAGAAACTACAAGACCCCACGCCGGAAGAATTG 5875197 Query 582 GAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTG 641 ||| ||| || ||||||||||| |||||||| | |||||||||| || |||||| || Sbjct 5875198 CAGAAAGAGGCACAGATGGAGGCTGAAGTCTTCGGACAGATCAAGAATGTCGAGAAGTTG 5875257 Query 642 CTAGCTCTGCTGAGCACTAG--TTCGAG-TGCCGACGCTAGGGACAATGAGGAGATCACT 698 || |||| ||||| || || | ||| | | || ||||||| ||||| ||||| Sbjct 5875258 CTCTCTCTACTGAGTACGAGCACTGGAGATATGAATGCCCGGGACAACGAGGAAATCACC 5875317 Query 699 TCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTAT 758 ||| ||||||| || ||||||| ||||||| |||||||| | || || || || Sbjct 5875318 GAGCTTTACCACAGCACGCTGTCGATCAGGCCGAAACTGATCGAGTTGATAGGAAAATAC 5875377 Query 759 TCGCAAAAGAAGGGTAAGTGGAATCTTTTACG--CGAA-TTTGTGTG---TTGGCCACTG 812 ||||| ||||| ||||| |||| ||| |||| ||| ||| ||| Sbjct 5875378 TCGCAGAAGAAAGGTAA--------CGCTACGAATGAACTTTGGGTGATATTG--AACTA 5875427 Query 813 ATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACT 872 || | ||||||| ||| ||| | ||||| || |||||||| || || || |||| Sbjct 5875428 ATATGGACACAGATGACTTCCAACAGTTGAACGAAAAATTCATCAAAGCCCGACGAGACT 5875487 Query 873 ACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCA 912 |||| | || | ||| |||| ||| | || | ||||| Sbjct 5875488 ACGAGGCACTATTAGAAACCTCCATGGCCCAGTCGGCGCA 5875527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945593547015