Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq3 288 3e-74
>seq3
Length=4123400
Score = 288 bits (318), Expect = 3e-74
Identities = 399/552 (72%), Gaps = 15/552 (3%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || |||||||| ||||| ||||| || || || || | |||||| || ||
Sbjct 2892922 TCAGGCACGACAGCAGCGACCGTTTCCCGAGTACGAGCGCTCTTCGACTTTCAACCTTCT 2892863
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| || ||||| || |||||||| || ||| |||||||||| |||||||| |||||
Sbjct 2892862 GAGCCGGGCGAATTACAATTCCGCAAGGGAGACGTTATTGCGGTGCTCGAGTCGGTGTAT 2892803
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
|||||||||||||||||||| || | || || || ||||| ||||| ||||| || |||
Sbjct 2892802 AAGGACTGGTGGAAGGGTTCGCTTAGAGGTCAAACTGGCATTTTCCCACTCAATTACGTC 2892743
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
||||||||||| |||||||| || || || | | ||| || |||||||||||||||
Sbjct 2892742 GAGAAGCTGCAAGATCCTACACCTGATGAACTACAAAAAGAGGCGCAGATGGAGGCGGAA 2892683
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668
||||| | |||| ||||| || || ||| |||| ||||| ||||||| || | |
Sbjct 2892682 GTCTTCGGACAGATAAAGAATGTTGAAAAGTTGCTGGCTCTATTGAGCACAAGCACAGGC 2892623
Query 669 G---CCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATA 725
| | ||| | ||||| |||||||| || ||| || || | || | || ||
Sbjct 2892622 GACACGAACGTCCGAGACAACGAGGAGATAACGGAGCTATATCATAGTACTTTATCAATC 2892563
Query 726 CGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTA----AGTGGAA 781
|||| |||||||||||||| || || |||||| | ||||||||||||| ||||||
Sbjct 2892562 AGGCCAAAGTTGATCGAGCTAATCGGGAAGTATACACAAAAGAAGGGTATGCTTGTGGAA 2892503
Query 782 TCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGA-TTTCACGCAGCT 840
|| || | | | || | ||||| | ||||||| ||||| ||| ||
Sbjct 2892502 ATACATA-GCCA--CGGGATAAACGCTAACGATCG---TACAGATGACTTTCA-GCAACT 2892450
Query 841 CAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTC 900
|||||||||||||||||||| || | ||||||||| | || | || | |||||| |
Sbjct 2892449 TAACGAGAAGTTCATCAAGGCTCGAAGGGACTACGAAGCTCTGTTGGAGACATCGATGGC 2892390
Query 901 GCAACCAGCGCA 912
|| |||| ||
Sbjct 2892389 TCACTCAGCACA 2892378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945575060085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |