Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20sideris_20[genbank_20GCA_5F000835395.1_202015-02-23] 5 sequences; 29,505,589 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3 248 3e-62 >seq3 Length=7151654 Score = 248 bits (274), Expect = 3e-62 Identities = 623/929 (67%), Gaps = 47/929 (5%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 |||| | ||||||||||||||||||| |||||| || || |||| ||| | | Sbjct 4198405 TCAAATCGAAGATCCTCGAGCGTATGGAACAATGGAGCAAGGACTTTGCCAACAACACAG 4198346 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATC--- 123 | | || || ||||||||||| || |||||| | || | ||||||| || ||| | Sbjct 4198345 AATTGGGTATTATGGAGCAGGCATACATGAGGTTAAAAGCCCAAAGTGAGT-TGACCGTG 4198287 Query 124 -AACTCT--GGTTCGTTGGGAGC-ACTGACCAACGTGTTGTAGACCCTAACCTGCGACCT 179 ||| || || | | ||| | |||| | | |||| || ||| | | |||| Sbjct 4198286 CAACAGCAAGGCTC--TCGCAGCCATTGACACAG----TCTAGATCCAAACATACAACCT 4198233 Query 180 CCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAG 239 ||| |||| |||| |||||||| || | || || || ||||||||||| || Sbjct 4198232 CCGCAAGCACCTGTCAAGAAACAGATCACTGAGTACGATCGGCAAAAGGAAGAGGAAGAA 4198173 Query 240 CTACAGATGGCGCTGGCACTCTCCGTCAAGGA-AAG----CGGGACCGAGCCA---TCCG 291 || |||||||| || ||| || || | || ||| | |||||| | || Sbjct 4198172 CTGCAGATGGCTCTCAGACTTTCGATCCAAGACAAGTCCACAGGACCGTCCTCGAGTCAA 4198113 Query 292 CCGCCAGGTCCAACCAGCCGCA-AGCAAAAGCCCCACAACAATCCGCCCCGGAACA-AG- 348 || ||| | | || ||| ||| | | ||||| | | || | |||| || Sbjct 4198112 CCATCAGCTGCT----GCGGCAGAGCTGTCGGC--ACAACCAGCGTCCTC--AACACAGC 4198061 Query 349 -AGCAGCATC--AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCG 405 ||| || | || | | | || || || ||||| | || ||||| || || || | Sbjct 4198060 AAGCCGCTCCGCAACCGGTACCCTCAGGCACGACAGCTTCAACGGTCTCACGGGTGCGAG 4198001 Query 406 CCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTA 465 | || | ||||| ||| ||||| || || || | || || || || || | | Sbjct 4198000 CACTATTTGACTTTCAGCCATCGGAGCCAGGAGAACTACAATTTCGAAAGGGTGATGTGA 4197941 Query 466 TTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCG 525 | || || || ||||| ||||||||||| |||||||| || ||||| ||||| ||||| | Sbjct 4197940 TCGCAGTACTGGAGTCGGTGTACAAGGATTGGTGGAAAGGGTCTCTTCGTGGGCAGACGG 4197881 Query 526 GCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGA 585 | |||||||||||||||||||||||||| | || ||||| || ||| || | || Sbjct 4197880 GTATCTTCCCCCTCAACTATGTCGAGAAATTACAAGATCCGACGCCGGAAGAATTGCAGC 4197821 Query 586 GAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAG 645 ||| || | | ||||||||||| |||| | ||||||||||| |||||| |||| | Sbjct 4197820 AAGAGGCGCGAACAGAGGCGGAAGTGTTTGGACAAATCAAGAACGTTGAGAAGTTGCTGG 4197761 Query 646 CTCTGCTGAGCACTAGTTCGAGTGCCGAC------GCTAGGGACAATGAGGAGATCACTT 699 | ||| ||||||| ||| | |||||| |||| ||||| || |||||||| Sbjct 4197760 CACTGTTGAGCACAAGT---ACAGCCGACATGAATCCTAGAGACAACGAAGAGATCACGG 4197704 Query 700 CGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATT 759 ||||||||||| ||| | || || | || |||||||| ||| | ||||| || ||| Sbjct 4197703 AGCTGTACCACAGCACACTATCCATCAGACCAAAGTTGATTGAGTTGATTGGGAAATATA 4197644 Query 760 CGCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTG-TGTGTTGGCCACTGA-TCGT 817 | |||||||| |||| | ||| | | | | | || || || |||| | | Sbjct 4197643 CTCAAAAGAAAGGTATGCGGATGAATGTGTCCAACTCTGATGGAAAGGGTGCTGACTTGC 4197584 Query 818 GTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAA 877 | ||||||| ||| ||| | |||||||| |||||||| || || || ||||||||| Sbjct 4197583 GACGCAGATGACTTCCAGCAATTGAACGAGAAATTCATCAAAGCGCGACGAGACTACGAA 4197524 Query 878 ACCCTCCTTGAAGCCTCGATGTCGCAACC 906 | ||||| || ||| ||| | || || Sbjct 4197523 GCACTCCTCGAGAGCTCAATGGCTCAGCC 4197495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945599127975