Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falciphora_20oryzae_20[genbank_20GCA_5F000733355.1_202014-07-25] 247 sequences; 50,779,446 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq10 170 6e-39 >seq10 Length=1070767 Score = 170 bits (188), Expect = 6e-39 Identities = 210/287 (73%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || || || || || ||| | || || || || | |||||| ||||||||| Sbjct 217701 GGCACAACGGCTGCGACAGTGTCCAGAGTGCGTGCTCTGTTTGACTTCGTGCCCTCGGAG 217642 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||||| | | ||| || |||||| | || ||||| |||||||| || |||||| Sbjct 217641 GACGGCGAGCTCGAGTTCAAGAAGGGCGACGTGATCGCGGTGCTCGAGTCGGTCTACAAG 217582 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || || || || |||| |||||||||||||||||||| |||||| Sbjct 217581 GACTGGTGGCGTGGCTCCCTCAAGGGCAAGACGGGCATCTTCCCCCTCAACTACGTCGAG 217522 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| || || || ||| ||||| | | ||||| ||||||||||| || ||| Sbjct 217521 AAGCTAGCCGACCCGACGCCGGACGAGCTGCAACGGGAAGCGCAGATGGAGGCAGAGGTC 217462 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 || | |||||||||| ||| |||||||| | | || || ||||| Sbjct 217461 TTCTCCGAGATCAAGACCGTTGAGAAGCTCTTGACACTCCTCAGCAC 217415 Score = 93.3 bits (102), Expect = 1e-15 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 ||||||| || |||||||| ||||||||||| |||||||| | || |||||||| ||| Sbjct 217124 CAGATGACTTTACGCAGCTTAACGAGAAGTTTATCAAGGCCAGGCGAGACTACGAGGCCC 217065 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 |||| || | || ||||| || ||| | |||||| ||||| Sbjct 217064 TCCTAGAGTCGTCCATGTCTCACCCACCCCAGCCCAGCTAC 217024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945556921965