Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonsecaea_20nubica_20[genbank_20GCA_5F001646965.1_202016-05-18] 258 sequences; 33,787,447 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq101 251 2e-63 >seq101 Length=409543 Score = 251 bits (278), Expect = 2e-63 Identities = 380/534 (71%), Gaps = 10/534 (2%) Strand=Plus/Minus Query 352 AGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTT 411 |||||||| | | | || || || || || || ||||| || || || || || || | Sbjct 317601 AGCATCAACCCGTGCCCTCAGGGACAACTGCCGCAACCGTTTCACGAGTACGGGCTCTCT 317542 Query 412 ACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGG 471 ||||| ||| || ||||| |||||| | |||||||| |||||| | || || | Sbjct 317541 TTGACTTTCAGCCTTCTGAACCGGGCGAGCTTCAGTTCCGCAAGGGCGACGTAATAGCCG 317482 Query 472 TTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCT 531 |||| || || || ||||| |||||||||||||| ||| |||| || || || ||||||| Sbjct 317481 TTCTTGAATCCGTATACAAAGACTGGTGGAAGGGGTCTTTGCGCGGCCAAACGGGCATCT 317422 Query 532 TCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAG 591 | ||||||||||||||||| || || || || || || |||||| | ||| ||||| Sbjct 317421 TTCCCCTCAACTATGTCGAAAAACTACAAGACCCCACTCCCGAGGAGTTGCAGAAAGAAG 317362 Query 592 CTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGC 651 | || ||||| || || || |||| |||||||||| || ||||| ||||| || ||| Sbjct 317361 CACAAATGGAAGCAGAGGTTTTTGGCCAGATCAAGAATGTCGAGAAACTGCTTGCCCTGT 317302 Query 652 TGAGCACTAGTTCGAGTG---CCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACC 708 | ||||| ||| || | | | ||| | ||||| || |||||||| | |||||| Sbjct 317301 TAAGCACGAGTACGGGAGACACGAACGTGCGCGACAACGAAGAGATCACCGAGTTGTACC 317242 Query 709 ACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGA 768 ||| || || | ||||| || ||||| || || || || || || ||| ||||||||| Sbjct 317241 ACAGCACGTTGGCAATACGACCAAAGTTAATTGAACTGATAGGGAAATATACGCAAAAGA 317182 Query 769 AGGGTAAGTGGAATCTTTTACG-CGAATTTGT---GTGTTGGCCACTGATCGTGT-TCCA 823 | ||||| | | | ||| | | |||| ||| | || | || | || Sbjct 317181 AAGGTAA-TCCAGAC-AGGACGATGGACTTGTCCCGTGCAATGAAATGCTAACGTATACA 317124 Query 824 GATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAA 877 || |||||| ||| ||||||||||| || ||||| || |||||||| || ||| Sbjct 317123 GACGATTTCCAGCAACTCAACGAGAAATTTATCAAAGCCCGCCGCGATTATGAA 317070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945555003510