Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769215.1_202014-10-10] 83 sequences; 41,590,745 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq55 199 1e-47 >seq55 Length=1899268 Score = 199 bits (220), Expect = 1e-47 Identities = 217/288 (75%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || ||||| ||||| || ||| || |||||||| | ||| ||| | |||||||| Sbjct 278573 GGTACTACAGCCGCTACTGTTAGCCGGGTGCGCGCCCTGTTCGATTTCGCACCCTCGGAG 278632 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || || ||| ||| ||| || ||||| | ||||| |||||||| ||||||||| Sbjct 278633 CCTGGTGAGCTGGAATTCAAGAAGGGCGATGTGATTGCTGTTCTCGAAAGCGTGTACAAG 278692 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| ||||||||| || || |||| |||||||| || |||||||||||||| Sbjct 278693 GACTGGTGGCGGGGTTCTCTACGAGGCAAGACTGGCATCTTTCCACTCAACTATGTCGAA 278752 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||||| || || || | | | || ||||||||||||| ||||| Sbjct 278753 AAGCTTGCCGATCCCACACCAGATGAATTGCAACGCGAGGCTCAGATGGAGGGCGAAGTG 278812 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 ||||| ||||||||||| || |||||||| || | || ||||||||| Sbjct 278813 TTTGCTGAGATCAAGAATGTTGAGAAGCTACTCACACTACTGAGCACT 278860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945585524385