Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20brasiliense_20[genbank_20GCA_5F001680685.1_202016-07-06]
22,229 sequences; 49,382,781 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq6949 178 4e-41
seq21098 107 6e-20
>seq6949
Length=2287
Score = 178 bits (196), Expect = 4e-41
Identities = 182/238 (76%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 421 CGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGT 480
|||| || || || |||||| | | ||| || || || || ||||||||||| |||
Sbjct 2287 CGCCTTCCGAGCCTGGCGAGCTCGAGTTCAAGAAGGGTGATATCATTGCGGTTCTGGAGA 2228
Query 481 CTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCA 540
|||||||||||||||||| ||| ||||| || || |||| |||||||| || ||||
Sbjct 2227 GCGTGTACAAGGACTGGTGGCGGGGCTCTCTCCGCGGCAAGACGGGCATCTTTCCTCTCA 2168
Query 541 ACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGG 600
||||||||||||||||| || || || ||| ||||| || | || || |||||||
Sbjct 2167 ACTATGTCGAGAAGCTGGCCGACCCCACGCCGGACGAGCTGCAGCGCGAGGCCCAGATGG 2108
Query 601 AGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
| | || || ||| | ||||||||||| || ||||||||||| || ||||||||||
Sbjct 2107 AATCAGAGGTGTTTTCCGAGATCAAGAATGTCGAGAAGCTGCTCACTTTGCTGAGCAC 2050
>seq21098
Length=211
Score = 107 bits (118), Expect = 6e-20
Identities = 119/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| |||||||| ||||||||| ||| || || ||||| | ||||| |||| || ||
Sbjct 53 GGCACCACAGCCGCTACCGTCAGCCGGGTGCGTGCCCTCTTTGACTTTGCGCCTTCCGAG 112
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| |||||| | | ||| || || || || ||||||||||| ||| |||||||||
Sbjct 113 CCTGGCGAGCTCGAGTTCAAGAAGGGTGATATCATTGCGGTTCTGGAGAGCGTGTACAAG 172
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATC 530
||||||||| ||| |||| | || ||||| ||||||
Sbjct 173 GACTGGTGGCGGGGGGCTCTCCCCGGGCAGACGGGCATC 211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15941723151255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |