Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000497325.2_202016-08-02] 428 sequences; 43,948,611 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq8 190 7e-45 >seq8 Length=4055048 Score = 190 bits (210), Expect = 7e-45 Identities = 216/290 (74%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 ||||||| ||||| || || || ||| || || || || | |||||| | || || | Sbjct 1993327 CTGGAACTACAGCGGCCACGGTGAGCCGGGTACGTGCGCTCTTCGACTTTGCTCCTTCTG 1993268 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | ||||| ||| ||| ||| || || || | ||||| ||||||||| ||| |||| Sbjct 1993267 AGCCCGGAGAGCTGGAATTCAAGAAGGGTGATGTAATTGCTGTTCTCGAGAGTGTATACA 1993208 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 ||||||||||| || ||||| | || |||||||||||||||| ||||||||||||| Sbjct 1993207 AGGACTGGTGGCGAGGCTCTCTCAGGGGCAAGACCGGCATCTTCCCGCTCAACTATGTCG 1993148 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 | ||||| ||||| || ||| ||||| | | || |||||||||||||| || | Sbjct 1993147 AAAAGCTTACCGATCCCACACCGGATGAGCTACAACGCGAGGCTCAGATGGAGGCTGAGG 1993088 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 | || || |||||||||||||| |||||||| || | | |||||||| Sbjct 1993087 TGTTCGCCGAGATCAAGAACGTTGAGAAGCTCCTCACGTTATTGAGCACT 1993038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945525354660