Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20circinatum_20[genbank_20GCA_5F000876485.1_202015-02-17] 909 sequences; 42,540,497 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq10 190 7e-45 >seq10 Length=117705 Score = 190 bits (210), Expect = 7e-45 Identities = 216/290 (74%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 ||||||| ||||| || || || ||| || || || || | |||||| | || || | Sbjct 14641 CTGGAACTACAGCGGCCACGGTGAGCCGGGTACGTGCGCTCTTCGACTTTGCTCCTTCTG 14700 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | ||||| ||| ||| ||| || || || | ||||| ||||||||| ||| |||| Sbjct 14701 AGCCCGGAGAGCTGGAATTCAAGAAGGGTGATGTAATTGCTGTTCTCGAGAGTGTATACA 14760 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 ||||||||||| || ||||| | || |||||||||||||||| ||||||||||||| Sbjct 14761 AGGACTGGTGGCGAGGCTCTCTCAGGGGCAAGACCGGCATCTTCCCGCTCAACTATGTCG 14820 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 | ||||| ||||| || ||| ||||| | | || |||||||||||||| || | Sbjct 14821 AAAAGCTTACCGATCCCACACCGGATGAGCTACAACGCGAGGCTCAGATGGAGGCTGAGG 14880 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 | || || |||||||||||||| |||||||| || | | |||||||| Sbjct 14881 TGTTCGCCGAGATCAAGAACGTTGAGAAGCTCCTCACGTTATTGAGCACT 14930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945441465855