Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20graminearum_20[genbank_20GCA_5F000966635.1_202015-03-31] 869 sequences; 36,490,312 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq263 178 4e-41 >seq263 Length=115291 Score = 178 bits (196), Expect = 4e-41 Identities = 212/288 (74%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || |||||||| || || || ||| || || || || | |||||| | ||||| || Sbjct 81903 GGCACCACAGCTGCGACAGTGAGCCGAGTGCGTGCTCTCTTCGACTTTGCACCCTCTGAG 81962 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| | | ||| || |||||| | ||||| |||||||| ||| ||||| Sbjct 81963 CCTGGCGAGCTTGAATTCAAGAAGGGCGACGTGATTGCTGTTCTCGAAAGTGTCTACAAA 82022 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| || || || | || |||| || ||||| || |||||||| || ||| Sbjct 82023 GATTGGTGGCGAGGCTCCCTCAGGGGCAAGACTGGTATCTTTCCACTCAACTACGTTGAG 82082 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||||| ||| ||| ||||| || | || |||||||||||||| || || Sbjct 82083 AAGCTTACCGATCCCACCGCGGATGAGCTTCAGCGTGAGGCTCAGATGGAGGCTGAGGTG 82142 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 ||||| |||||||||||||| |||||||| || | |||| |||||| Sbjct 82143 TTTGCCGAGATCAAGAACGTCGAGAAGCTTCTCACATTGCTCAGCACT 82190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945448442055