Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3342 183 1e-42 >seq3342 Length=342005 Score = 183 bits (202), Expect = 1e-42 Identities = 205/274 (75%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 ||||||| || || || || || ||| || ||||| || | |||||| | || || | Sbjct 117547 CTGGAACTACCGCGGCCACGGTGAGCCGGGTCCGCGCGCTCTTCGACTTTGCCCCTTCTG 117606 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | ||||||||| ||| ||| || ||||| | ||||| ||||||||| ||| |||| Sbjct 117607 AGCCCGGCGAGCTGGAATTCAAGAAGGGCGATGTGATTGCTGTTCTCGAGAGTGTATACA 117666 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 ||||||||||| || ||||| | || |||| ||||||||||| ||||||||||||| Sbjct 117667 AGGACTGGTGGCGAGGCTCTCTTAGGGGCAAGACTGGCATCTTCCCGCTCAACTATGTCG 117726 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 | || || ||||| || ||| ||| | | | ||||| ||||||||||| || | Sbjct 117727 AAAAACTTACCGATCCCACACCGGATGAGTTACAACGTGAAGCCCAGATGGAGGCCGAGG 117786 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCT 643 | || || |||||||||||||| |||||||| || Sbjct 117787 TGTTCGCCGAGATCAAGAACGTTGAGAAGCTCCT 117820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944950341375