Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1288 176 1e-40
>seq1288
Length=107567
Score = 176 bits (194), Expect = 1e-40
Identities = 211/287 (74%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| |||||||| ||||| || ||| || || || || | |||||| ||||||| ||
Sbjct 6969 GGCACCACAGCTGCTACAGTGAGCCGAGTACGTGCTCTCTTCGACTTTGCGCCCTCTGAG 7028
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| || ||| | | ||| || || ||| | ||||| ||||| ||| || |||||
Sbjct 7029 CCTGGTGAGCTTGAATTCAAGAAGGGTGACGTGATTGCTGTTCTTGAGAGCGTCTACAAA 7088
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|| |||||| || ||||| | || |||| || ||||| || ||||||||||| ||
Sbjct 7089 GATTGGTGGCGAGGCTCTCTCAGGGGCAAGACTGGTATCTTTCCACTCAACTATGTGGAA 7148
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||||| ||||||||| ||| ||||| || | || |||||||||||||| || ||
Sbjct 7149 AAGCTCACCGATCCTACCGCGGATGAGCTACAGCGTGAGGCTCAGATGGAGGCCGAGGTG 7208
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
||||| ||||||||||| || |||||||| || | |||| |||||
Sbjct 7209 TTTGCTGAGATCAAGAATGTTGAGAAGCTTCTCACATTGCTCAGCAC 7255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945323393670
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |