Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1288 176 1e-40 >seq1288 Length=107567 Score = 176 bits (194), Expect = 1e-40 Identities = 211/287 (74%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || |||||||| ||||| || ||| || || || || | |||||| ||||||| || Sbjct 6969 GGCACCACAGCTGCTACAGTGAGCCGAGTACGTGCTCTCTTCGACTTTGCGCCCTCTGAG 7028 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || || ||| | | ||| || || ||| | ||||| ||||| ||| || ||||| Sbjct 7029 CCTGGTGAGCTTGAATTCAAGAAGGGTGACGTGATTGCTGTTCTTGAGAGCGTCTACAAA 7088 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| || ||||| | || |||| || ||||| || ||||||||||| || Sbjct 7089 GATTGGTGGCGAGGCTCTCTCAGGGGCAAGACTGGTATCTTTCCACTCAACTATGTGGAA 7148 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||||||||| ||| ||||| || | || |||||||||||||| || || Sbjct 7149 AAGCTCACCGATCCTACCGCGGATGAGCTACAGCGTGAGGCTCAGATGGAGGCCGAGGTG 7208 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||||| ||||||||||| || |||||||| || | |||| ||||| Sbjct 7209 TTTGCTGAGATCAAGAATGTTGAGAAGCTTCTCACATTGCTCAGCAC 7255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945323393670