Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31] 287 sequences; 36,399,802 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1 178 4e-41 >seq1 Length=273682 Score = 178 bits (196), Expect = 4e-41 Identities = 212/288 (74%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || |||||||| || || || ||| || || || || | |||||| | ||||| || Sbjct 35339 GGCACCACAGCTGCGACAGTGAGCCGAGTGCGTGCTCTCTTCGACTTTGCACCCTCTGAG 35398 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| | | ||| || |||||| | ||||| |||||||| ||| ||||| Sbjct 35399 CCTGGCGAGCTTGAATTCAAGAAGGGCGACGTGATTGCTGTTCTCGAAAGTGTCTACAAA 35458 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| || || || | || |||| || ||||| || |||||||| || ||| Sbjct 35459 GATTGGTGGCGAGGCTCCCTCAGGGGCAAGACTGGTATCTTTCCACTCAACTACGTTGAG 35518 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||||| ||| ||| ||||| || | || |||||||||||||| || || Sbjct 35519 AAGCTTACCGATCCCACCGCGGATGAGCTTCAGCGTGAGGCTCAGATGGAGGCTGAGGTG 35578 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 ||||| |||||||||||||| |||||||| || | |||| |||||| Sbjct 35579 TTTGCCGAGATCAAGAACGTCGAGAAGCTTCTCACATTGCTCAGCACT 35626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945549945765