Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20meridionale_20[genbank_20GCA_5F001717855.1_202016-08-31]
287 sequences; 36,399,802 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1 178 4e-41
>seq1
Length=273682
Score = 178 bits (196), Expect = 4e-41
Identities = 212/288 (74%), Gaps = 0/288 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| |||||||| || || || ||| || || || || | |||||| | ||||| ||
Sbjct 35339 GGCACCACAGCTGCGACAGTGAGCCGAGTGCGTGCTCTCTTCGACTTTGCACCCTCTGAG 35398
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| |||||| | | ||| || |||||| | ||||| |||||||| ||| |||||
Sbjct 35399 CCTGGCGAGCTTGAATTCAAGAAGGGCGACGTGATTGCTGTTCTCGAAAGTGTCTACAAA 35458
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|| |||||| || || || | || |||| || ||||| || |||||||| || |||
Sbjct 35459 GATTGGTGGCGAGGCTCCCTCAGGGGCAAGACTGGTATCTTTCCACTCAACTACGTTGAG 35518
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||||| ||||| ||| ||| ||||| || | || |||||||||||||| || ||
Sbjct 35519 AAGCTTACCGATCCCACCGCGGATGAGCTTCAGCGTGAGGCTCAGATGGAGGCTGAGGTG 35578
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
||||| |||||||||||||| |||||||| || | |||| ||||||
Sbjct 35579 TTTGCCGAGATCAAGAACGTCGAGAAGCTTCTCACATTGCTCAGCACT 35626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945549945765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |