Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F000733055.2_202015-06-08] 1,166 sequences; 50,550,233 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq80 172 2e-39 >seq80 Length=176131 Score = 172 bits (190), Expect = 2e-39 Identities = 214/293 (73%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 || ||||||| ||||| || || || ||| || || || || | |||||| | || | Sbjct 59152 CAGCTGGAACTACAGCGGCCACGGTGAGCCGGGTACGTGCGCTCTTCGACTTTGCTCCTT 59093 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 | || ||||| ||| ||| ||| || || || | ||||| ||||||||| ||| | Sbjct 59092 CTGAGCCCGGAGAGCTGGAATTCAAGAAGGGTGATGTGATTGCTGTTCTCGAGAGTGTAT 59033 Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546 |||||||||||||| || ||||| | || |||| ||||||||||| |||||||||| Sbjct 59032 ACAAGGACTGGTGGCGAGGCTCTCTCAGGGGCAAGACTGGCATCTTCCCGCTCAACTATG 58973 Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606 |||| ||||| ||||| || ||| || | | | || ||||||||||| || | Sbjct 58972 TCGAAAAGCTCACCGATCCCACACCGGATGAATTACAACGCGAGGCTCAGATGGAAGCCG 58913 Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 | || || || |||||||||||||| |||||||| || | | |||||||| Sbjct 58912 AGGTGTTCGCCGAGATCAAGAACGTTGAGAAGCTCCTCACGTTATTGAGCACT 58860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945396643770