Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20[genbank_20GCA_5F002233935.1_202017-07-27] 1,277 sequences; 50,403,639 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq313 172 2e-39 >seq313 Length=896020 Score = 172 bits (190), Expect = 2e-39 Identities = 214/293 (73%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 || ||||||| ||||| || || || ||| || || || || | |||||| | || | Sbjct 317194 CAGCTGGAACTACAGCGGCCACGGTGAGCCGGGTACGTGCGCTCTTCGACTTTGCTCCTT 317135 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 | || ||||| ||| ||| ||| || || || | ||||| ||||||||| ||| | Sbjct 317134 CTGAGCCCGGAGAGCTGGAATTCAAGAAGGGTGATGTGATTGCTGTTCTCGAGAGTGTAT 317075 Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546 |||||||||||||| || ||||| | || |||| ||||||||||| |||||||||| Sbjct 317074 ACAAGGACTGGTGGCGAGGCTCTCTCAGGGGCAAGACTGGCATCTTCCCGCTCAACTATG 317015 Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606 |||| ||||| ||||| || ||| || | | | || ||||||||||| || | Sbjct 317014 TCGAAAAGCTCACCGATCCCACACCGGATGAATTACAACGCGAGGCTCAGATGGAAGCCG 316955 Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 | || || || |||||||||||||| |||||||| || | | |||||||| Sbjct 316954 AGGTGTTCGCCGAGATCAAGAACGTTGAGAAGCTCCTCACGTTATTGAGCACT 316902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945377284815