Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20cubense_20[genbank_20GCA_5F001696625.1_2
02016-07-29] 1,370 sequences; 46,735,106 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1012 172 2e-39
>seq1012
Length=156515
Score = 172 bits (190), Expect = 2e-39
Identities = 214/293 (73%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426
|| ||||||| ||||| || || || ||| || || || || | |||||| | || |
Sbjct 55188 CAGCTGGAACTACAGCGGCCACGGTGAGCCGGGTACGTGCGCTCTTCGACTTTGCTCCTT 55247
Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486
| || ||||| ||| ||| ||| || || || | ||||| ||||||||| ||| |
Sbjct 55248 CTGAGCCCGGAGAGCTGGAATTCAAGAAGGGTGATGTGATTGCTGTTCTCGAGAGTGTAT 55307
Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546
|||||||||||||| || ||||| | || |||| ||||||||||| ||||||||||
Sbjct 55308 ACAAGGACTGGTGGCGAGGCTCTCTCAGGGGCAAGACTGGCATCTTCCCGCTCAACTATG 55367
Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606
|||| ||||| ||||| || ||| || | | | || ||||||||||| || |
Sbjct 55368 TCGAAAAGCTCACCGATCCCACACCGGATGAATTACAACGCGAGGCTCAGATGGAAGCCG 55427
Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
| || || || |||||||||||||| |||||||| || | | ||||||||
Sbjct 55428 AGGTGTTCGCCGAGATCAAGAACGTTGAGAAGCTCCTCACGTTATTGAGCACT 55480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945361065150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |