Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865.
1_202016-12-05] 1,631 sequences; 53,986,354 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1202 185 3e-43
>seq1202
Length=157391
Score = 185 bits (204), Expect = 3e-43
Identities = 215/290 (74%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429
||||||| || || || || || ||| || ||||| || | |||||| | || || |
Sbjct 21314 CTGGAACTACCGCGGCCACGGTGAGCCGGGTCCGCGCGCTCTTCGACTTTGCCCCTTCTG 21255
Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489
| ||||||||| ||| ||| || ||||| | ||||| ||||||||| ||| ||||
Sbjct 21254 AGCCCGGCGAGCTGGAATTCAAGAAGGGCGATGTGATTGCTGTTCTCGAGAGTGTATACA 21195
Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549
||||||||||| || ||||| | || |||| ||||||||||| |||||||||||||
Sbjct 21194 AGGACTGGTGGCGAGGCTCTCTTAGGGGCAAGACTGGCATCTTCCCGCTCAACTATGTCG 21135
Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609
| || || ||||| || ||| ||| | | | ||||| ||||||||||| || |
Sbjct 21134 AAAAACTTACCGATCCCACACCGGATGAGTTACAACGTGAAGCCCAGATGGAGGCCGAGG 21075
Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
| || || |||||||||||||| |||||||| || | | ||||||||
Sbjct 21074 TTTTCGCCGAGATCAAGAACGTTGAGAAGCTCCTCACATTATTGAGCACT 21025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945315545445
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |