Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20oxysporum_20f._20melongenae_20[genbank_20GCA_5F001888865. 1_202016-12-05] 1,631 sequences; 53,986,354 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1202 185 3e-43 >seq1202 Length=157391 Score = 185 bits (204), Expect = 3e-43 Identities = 215/290 (74%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 ||||||| || || || || || ||| || ||||| || | |||||| | || || | Sbjct 21314 CTGGAACTACCGCGGCCACGGTGAGCCGGGTCCGCGCGCTCTTCGACTTTGCCCCTTCTG 21255 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | ||||||||| ||| ||| || ||||| | ||||| ||||||||| ||| |||| Sbjct 21254 AGCCCGGCGAGCTGGAATTCAAGAAGGGCGATGTGATTGCTGTTCTCGAGAGTGTATACA 21195 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 ||||||||||| || ||||| | || |||| ||||||||||| ||||||||||||| Sbjct 21194 AGGACTGGTGGCGAGGCTCTCTTAGGGGCAAGACTGGCATCTTCCCGCTCAACTATGTCG 21135 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 | || || ||||| || ||| ||| | | | ||||| ||||||||||| || | Sbjct 21134 AAAAACTTACCGATCCCACACCGGATGAGTTACAACGTGAAGCCCAGATGGAGGCCGAGG 21075 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 | || || |||||||||||||| |||||||| || | | |||||||| Sbjct 21074 TTTTCGCCGAGATCAAGAACGTTGAGAAGCTCCTCACATTATTGAGCACT 21025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945315545445