Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2 199 1e-47 >seq2 Length=9166667 Score = 199 bits (220), Expect = 1e-47 Identities = 215/285 (75%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || |||||||| ||||| || |||||| || || || | |||||| ||||||| ||| Sbjct 1686588 GGCACCACAGCTGCTACAGTGAGCCGCGTACGTGCTCTCTTCGACTTTGCGCCCTCTGAA 1686647 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| | | ||| || |||||| | ||||| ||||| ||| || |||||| Sbjct 1686648 CCTGGCGAGCTTGAATTCAAGAAGGGCGACGTGATTGCTGTTCTTGAGAGCGTCTACAAG 1686707 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| || ||||| | || |||| || ||||| || ||||||||||| ||| Sbjct 1686708 GATTGGTGGCGAGGCTCTCTCAGGGGCAAGACTGGTATCTTTCCTCTCAACTATGTTGAG 1686767 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||||||||| ||| ||| | || | || |||||||||||||| || || Sbjct 1686768 AAGCTCACCGATCCTACCGCGGATGAGTTGCAGCGTGAGGCTCAGATGGAGGCCGAGGTG 1686827 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 ||||| |||||||||||||| ||||| || || | ||||| ||| Sbjct 1686828 TTTGCTGAGATCAAGAACGTTGAGAAACTTCTTACGCTGCTCAGC 1686872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945568432695