Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq77 163 9e-37 >seq77 Length=154413 Score = 163 bits (180), Expect = 9e-37 Identities = 209/288 (73%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || |||||||| || || || ||| || || || || | ||||| | ||||| || Sbjct 87909 GGCACCACAGCTGCAACAGTAAGCCGAGTGCGTGCTCTCTTTGACTTTGCACCCTCTGAG 87968 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| | | ||| || || ||| | ||||| ||||| ||| ||| ||||| Sbjct 87969 CCTGGCGAGCTTGAATTCAAGAAGGGTGACGTAATTGCTGTTCTTGAGAGTGTCTACAAA 88028 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| || ||||| | || |||| || ||||| || |||||||| || ||| Sbjct 88029 GATTGGTGGCGAGGCTCTCTCAGGGGCAAGACTGGTATCTTTCCACTCAACTACGTTGAG 88088 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 || || ||||| || ||| ||||| || | || |||||||||||||| || || Sbjct 88089 AAACTTACCGATCCCACTGCGGATGAGCTGCAGCGCGAGGCTCAGATGGAGGCCGAGGTG 88148 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 ||||| |||||||||||||| |||||||| || | |||| |||||| Sbjct 88149 TTTGCCGAGATCAAGAACGTTGAGAAGCTTCTCACATTGCTCAGCACT 88196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945516111195