Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F000974265.2_202016-
07-14] 26 sequences; 37,070,975 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2 187 8e-44
>seq2
Length=8944178
Score = 187 bits (206), Expect = 8e-44
Identities = 214/288 (74%), Gaps = 0/288 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
||||||||||| || || || ||| || || || || | |||||| | ||||| ||
Sbjct 1608854 GGAACCACAGCTGCGACAGTGAGCCGAGTGCGTGCTCTCTTCGACTTTGCACCCTCTGAG 1608913
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| || ||| | | ||| || |||||| | ||||| |||||||| ||| |||||
Sbjct 1608914 CCTGGTGAGCTTGAATTCAAGAAGGGCGACGTGATTGCTGTTCTCGAAAGTGTCTACAAA 1608973
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|| |||||| || ||||| | || |||| || || ||||| ||||||||||| |||
Sbjct 1608974 GATTGGTGGCGAGGCTCTCTCAGGGGCAAGACTGGTATTTTCCCACTCAACTATGTTGAG 1609033
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||||| ||||| ||| ||| ||||| || | || |||||||||||||| || ||
Sbjct 1609034 AAGCTTACCGATCCCACCGCGGATGAGCTGCAGCGCGAGGCTCAGATGGAGGCCGAGGTG 1609093
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
||||| |||||||||||||| |||||||| || | |||| ||||||
Sbjct 1609094 TTTGCCGAGATCAAGAACGTCGAGAAGCTTCTCACATTGCTCAGCACT 1609141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945595465470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |