Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20pseudograminearum_20[genbank_20GCA_5F001703955.1_202016- 08-12] 4 sequences; 36,178,456 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2 187 8e-44 >seq2 Length=8818970 Score = 187 bits (206), Expect = 8e-44 Identities = 214/288 (74%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 ||||||||||| || || || ||| || || || || | |||||| | ||||| || Sbjct 1582679 GGAACCACAGCTGCGACAGTGAGCCGAGTGCGTGCTCTCTTCGACTTTGCACCCTCTGAG 1582738 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || || ||| | | ||| || |||||| | ||||| |||||||| ||| ||||| Sbjct 1582739 CCTGGTGAGCTTGAATTCAAGAAGGGCGACGTGATTGCTGTTCTCGAAAGTGTCTACAAA 1582798 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| || ||||| | || |||| || || ||||| ||||||||||| ||| Sbjct 1582799 GATTGGTGGCGAGGCTCTCTCAGGGGCAAGACTGGTATTTTCCCACTCAACTATGTTGAG 1582858 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||||| ||| ||| ||||| || | || |||||||||||||| || || Sbjct 1582859 AAGCTTACCGATCCCACCGCGGATGAGCTGCAGCGCGAGGCTCAGATGGAGGCCGAGGTG 1582918 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 ||||| |||||||||||||| |||||||| || | |||| |||||| Sbjct 1582919 TTTGCCGAGATCAAGAACGTCGAGAAGCTTCTCACATTGCTCAGCACT 1582966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945599302380