Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20sp._20FSSC_5F6_20[genbank_20GCA_5F001633045.1_202016-04- 27] 103 sequences; 46,940,970 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq32 187 8e-44 >seq32 Length=3227256 Score = 187 bits (206), Expect = 8e-44 Identities = 214/288 (74%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || |||||||| || ||||| ||| || || ||||| | |||||| ||| |||||| Sbjct 2381091 GGTACCACAGCTGCCACCGTTAGCCGAGTACGTGCCCTCTTCGACTTTGTGCCTTCGGAA 2381150 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||| ||| ||| ||| || || || || |||||||| | || || |||||| Sbjct 2381151 CCCGGTGAGCTGGAGTTCAAGAAGGGTGATATAATTGCGGTCTTGGAAAGCGTTTACAAG 2381210 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 |||||||||| || ||||| | || |||| || |||||||| |||||||||||||| Sbjct 2381211 GACTGGTGGAGAGGCTCTCTCAGAGGCAAGACGGGTATCTTCCCACTCAACTATGTCGAA 2381270 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||| || || || ||| ||| | || | || ||||||||||| |||| || Sbjct 2381271 AAGCTGGCCGACCCCACGCCGGACGAGTTGCAGCGCGAGGCTCAGATGGAATCGGAGGTG 2381330 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 |||| ||||||||||| || |||||||| || || ||||||| ||| Sbjct 2381331 TTTGGCGAGATCAAGAATGTTGAGAAGCTTCTCACTTTGCTGAGTACT 2381378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945582036285