Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20udum_20[genbank_20GCA_5F002194535.1_202017-06-15] 712 sequences; 56,380,608 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq556 147 7e-32 >seq556 Length=5145791 Score = 147 bits (162), Expect = 7e-32 Identities = 208/294 (71%), Gaps = 4/294 (1%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 ||||||| ||||| || || || ||| || || || || | ||| || | || || | Sbjct 2553431 CTGGAACTACAGCGGCCACGGTGAGCCGGGTACGTGCGCTCTTCGATTTTGCTCCTTCTG 2553490 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | ||||| ||| ||| ||| || || || | ||||| ||||||||| ||| |||| Sbjct 2553491 AGCCCGGAGAGCTGGAATTCAAGAAGGGTGATGTGATTGCTGTTCTCGAGAGTGTATACA 2553550 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 ||||||||||| || ||||| | || |||||||||||||||| ||||||||||||| Sbjct 2553551 AGGACTGGTGGCGAGGCTCTCTCAGAGGCAAGACCGGCATCTTCCCGCTCAACTATGTCG 2553610 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 | || || || || || ||| ||| | | | || |||||||||||||| || | Sbjct 2553611 AAAAACTTACCGACCCCACACCGGATGAGTTACAACGCGAGGCTCAGATGGAGGCCGAGG 2553670 Query 610 TCT----TTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 | | ||||||||||||| |||||||| || | | |||||||| Sbjct 2553671 TGTNNNNNNNNNNAGATCAAGAACGTTGAGAAGCTTCTCACGTTATTGAGCACT 2553724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945475823640