Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06] 25,997 sequences; 50,938,851 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq11472 156 1e-34 seq6932 152 2e-33 >seq11472 Length=1662 Score = 156 bits (172), Expect = 1e-34 Identities = 146/186 (78%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || |||||||| ||||||||| ||| || || ||||| | ||||| |||| || || Sbjct 1468 GGCACCACAGCCGCTACCGTCAGCCGGGTGCGTGCCCTCTTTGACTTTGCGCCTTCCGAG 1527 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || |||||| | | ||| || || || || ||||||||||| ||| |||||||||| Sbjct 1528 CCTGGCGAGCTCGAGTTCAAGAAGGGTGATATCATTGCGGTTCTGGAGAGTGTGTACAAG 1587 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| ||| ||||| || || |||| |||||||| || ||||||||||||||| Sbjct 1588 GACTGGTGGCGGGGCTCTCTCCGCGGCAAGACGGGCATCTTTCCTCTCAACTATGTCGAG 1647 Query 552 AAGCTG 557 |||||| Sbjct 1648 AAGCTG 1653 >seq6932 Length=2631 Score = 152 bits (168), Expect = 2e-33 Identities = 140/177 (79%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 482 TGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAA 541 ||||||||||||||||||| ||| ||||| || || |||| |||||||| || ||||| Sbjct 2631 TGTGTACAAGGACTGGTGGCGGGGCTCTCTCCGCGGCAAGACGGGCATCTTTCCTCTCAA 2572 Query 542 CTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGA 601 |||||||||||||||| || || || ||| ||||| || | || || |||||||| Sbjct 2571 CTATGTCGAGAAGCTGGCCGACCCCACGCCGGACGAGCTGCAGCGCGAGGCCCAGATGGA 2512 Query 602 GGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 | || || ||| | ||||||||||| || ||||||||||| || |||||||||| Sbjct 2511 ATCAGAGGTGTTTTCCGAGATCAAGAATGTCGAGAAGCTGCTCACTTTGCTGAGCAC 2455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15941065993215