Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20virguliforme_20[genbank_20GCA_5F001680665.1_202016-07-06]
25,997 sequences; 50,938,851 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq11472 156 1e-34
seq6932 152 2e-33
>seq11472
Length=1662
Score = 156 bits (172), Expect = 1e-34
Identities = 146/186 (78%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| |||||||| ||||||||| ||| || || ||||| | ||||| |||| || ||
Sbjct 1468 GGCACCACAGCCGCTACCGTCAGCCGGGTGCGTGCCCTCTTTGACTTTGCGCCTTCCGAG 1527
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| |||||| | | ||| || || || || ||||||||||| ||| ||||||||||
Sbjct 1528 CCTGGCGAGCTCGAGTTCAAGAAGGGTGATATCATTGCGGTTCTGGAGAGTGTGTACAAG 1587
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| ||| ||||| || || |||| |||||||| || |||||||||||||||
Sbjct 1588 GACTGGTGGCGGGGCTCTCTCCGCGGCAAGACGGGCATCTTTCCTCTCAACTATGTCGAG 1647
Query 552 AAGCTG 557
||||||
Sbjct 1648 AAGCTG 1653
>seq6932
Length=2631
Score = 152 bits (168), Expect = 2e-33
Identities = 140/177 (79%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 482 TGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAA 541
||||||||||||||||||| ||| ||||| || || |||| |||||||| || |||||
Sbjct 2631 TGTGTACAAGGACTGGTGGCGGGGCTCTCTCCGCGGCAAGACGGGCATCTTTCCTCTCAA 2572
Query 542 CTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGA 601
|||||||||||||||| || || || ||| ||||| || | || || ||||||||
Sbjct 2571 CTATGTCGAGAAGCTGGCCGACCCCACGCCGGACGAGCTGCAGCGCGAGGCCCAGATGGA 2512
Query 602 GGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
| || || ||| | ||||||||||| || ||||||||||| || ||||||||||
Sbjct 2511 ATCAGAGGTGTTTTCCGAGATCAAGAATGTCGAGAAGCTGCTCACTTTGCTGAGCAC 2455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15941065993215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |