Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1 179 1e-41 >seq1 Length=15654088 Score = 179 bits (198), Expect = 1e-41 Identities = 213/289 (74%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || ||||| || || || ||| | || || || || | ||||||| |||||||| Sbjct 12171827 CTGGCACAACAGCTGCGACAGTGTCCAGAGTGCGTGCTCTGTTTGACTTCATGCCCTCGG 12171768 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 | ||||||| | | ||| || |||||| | || ||||| |||||||| || |||| Sbjct 12171767 AGGACGGCGAGCTCGAGTTCAAGAAGGGCGACGTGATCGCGGTGCTCGAGTCGGTCTACA 12171708 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 ||||||||||| || || || || |||| |||||||| ||||||||||| |||| Sbjct 12171707 AGGACTGGTGGCGTGGCTCCCTCAAGGGCAAGACGGGCATCTTTCCCCTCAACTACGTCG 12171648 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 |||||||| || || || || ||||| | | || || ||||||||||| || | Sbjct 12171647 AGAAGCTGGCCGACCCGACGCCAGACGAGCTGCAACGGGAGGCGCAGATGGAGGCAGAGG 12171588 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||||| | |||||||||| ||| |||||||| | | || || ||||| Sbjct 12171587 TCTTTTCCGAGATCAAGACCGTTGAGAAGCTTTTGACACTCCTCAGCAC 12171539 Score = 87.8 bits (96), Expect = 6e-14 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 ||||||| || || ||||| ||||||||||| |||||||| | || |||||||| ||| Sbjct 12171247 CAGATGACTTTACACAGCTTAACGAGAAGTTTATCAAGGCCAGGCGAGACTACGAGGCCC 12171188 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 |||| || | || ||||| || ||| | |||||| ||||| Sbjct 12171187 TCCTGGAGTCGTCCATGTCTCACCCACCCCAGCCCAGCTAC 12171147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945586047600