Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1 179 1e-41
>seq1
Length=15654088
Score = 179 bits (198), Expect = 1e-41
Identities = 213/289 (74%), Gaps = 0/289 (0%)
Strand=Plus/Minus
Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429
|||| || ||||| || || || ||| | || || || || | ||||||| ||||||||
Sbjct 12171827 CTGGCACAACAGCTGCGACAGTGTCCAGAGTGCGTGCTCTGTTTGACTTCATGCCCTCGG 12171768
Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489
| ||||||| | | ||| || |||||| | || ||||| |||||||| || ||||
Sbjct 12171767 AGGACGGCGAGCTCGAGTTCAAGAAGGGCGACGTGATCGCGGTGCTCGAGTCGGTCTACA 12171708
Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549
||||||||||| || || || || |||| |||||||| ||||||||||| ||||
Sbjct 12171707 AGGACTGGTGGCGTGGCTCCCTCAAGGGCAAGACGGGCATCTTTCCCCTCAACTACGTCG 12171648
Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609
|||||||| || || || || ||||| | | || || ||||||||||| || |
Sbjct 12171647 AGAAGCTGGCCGACCCGACGCCAGACGAGCTGCAACGGGAGGCGCAGATGGAGGCAGAGG 12171588
Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
||||| | |||||||||| ||| |||||||| | | || || |||||
Sbjct 12171587 TCTTTTCCGAGATCAAGACCGTTGAGAAGCTTTTGACACTCCTCAGCAC 12171539
Score = 87.8 bits (96), Expect = 6e-14
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881
||||||| || || ||||| ||||||||||| |||||||| | || |||||||| |||
Sbjct 12171247 CAGATGACTTTACACAGCTTAACGAGAAGTTTATCAAGGCCAGGCGAGACTACGAGGCCC 12171188
Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
|||| || | || ||||| || ||| | |||||| |||||
Sbjct 12171187 TCCTGGAGTCGTCCATGTCTCACCCACCCCAGCCCAGCTAC 12171147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945586047600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |