Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20flava_20[genbank_20GCA_5F900188565.1_202017-06-24] 1,819 sequences; 29,823,260 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq10 210 7e-51 >seq10 Length=493570 Score = 210 bits (232), Expect = 7e-51 Identities = 217/284 (76%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 ||||||||||| || || ||| ||| ||||| ||||| |||||||| ||||| || Sbjct 272021 GGAACCACAGCTGCGACAGTCAGCCGAGTTCGTGCCCTGTACGACTTTGTCCCCTCTGAG 271962 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || || ||| ||| ||| | |||||| | ||||| || || ||| ||||||||| Sbjct 271961 CCTGGAGAGCTGGAGTTCAAGAGGGGCGACGTCATTGCCGTCCTGGAGAGCGTGTACAAG 271902 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 |||||||||| ||| || || ||| |||| |||||||||||||||||||| || ||| Sbjct 271901 GACTGGTGGAGGGGCTCGCTCAAGGGAAAGACGGGCATCTTCCCCCTCAACTACGTTGAG 271842 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||| || ||| || || ||||||||| || | || || ||||||||||| || || Sbjct 271841 AAGTTGACGGACCCGACGCCCGAGGAGCTCCAGCGCGAGGCGCAGATGGAGGCCGAGGTG 271782 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655 ||||| ||||||||||| || ||||||||||| | ||||| || Sbjct 271781 TTTGCTGAGATCAAGAATGTCGAGAAGCTGCTCACCCTGCTTAG 271738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945282757305