Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2 197 4e-47
>seq2
Length=1716929
Score = 197 bits (218), Expect = 4e-47
Identities = 247/333 (74%), Gaps = 13/333 (4%)
Strand=Plus/Plus
Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429
|||| ||||| || || || ||| |||||| | ||||| |||||||| |||||||
Sbjct 839242 CTGGCACCACGGCCGCGACTGTCAGCCGCGTCAGGGCCCTGTACGACTTTGTCCCCTCGG 839301
Query 430 AACCCGGCGAGTTGGCTTTC---CGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486
||||||||||| | | ||| ||| |||||| | || || || |||||| || |
Sbjct 839302 AACCCGGCGAGCTCGAGTTCAAGCGC---GGCGACGTCATCGCCGTCCTCGAGAGCGTCT 839358
Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546
||||||||||||||| ||| || || || |||| |||||||||||||||||||| |
Sbjct 839359 ACAAGGACTGGTGGAGGGGCTCGCTCAAGGGCAAGACGGGCATCTTCCCCCTCAACTACG 839418
Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606
|||||||||| || || || || |||||| || | || |||||||||||||| |
Sbjct 839419 TCGAGAAGCTCACAGACCCGACGCCCGACGAGCTCCAGCGCGAGGCTCAGATGGAGGCCG 839478
Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC---ACTAGTT 663
| || ||||| ||||||||||| || ||||||||| | | || ||||| |||
Sbjct 839479 AGGTGTTTGCCGAGATCAAGAATGTCGAGAAGCTGTTGACGTTGTTGAGCGCGTCTAACA 839538
Query 664 CGAGTGCCGACGCTAG--GGACAATGAGGAGAT 694
|| | |||| || || |||||||||||||||
Sbjct 839539 CG-GCGCCG-CGGGAGGAGGACAATGAGGAGAT 839569
Score = 84.2 bits (92), Expect = 7e-13
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881
|||| || || || |||||||||||||| ||||||||||| || || |||||||| |||
Sbjct 839781 CAGACGACTTTACACAGCTCAACGAGAAATTCATCAAGGCCCGACGAGACTACGAGGCCC 839840
Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
|||| || | || ||||| || || | |||||| ||||
Sbjct 839841 TCCTCGAGTCGTCCATGTCCCACCCTCCCCAGCCCAACTAC 839881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945544190400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |