Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1672 313 8e-82 >seq1672 Length=6523 Score = 313 bits (346), Expect = 8e-82 Identities = 510/730 (70%), Gaps = 47/730 (6%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 |||| || ||||| || ||||| |||| || ||||| ||||||||| |||| |||| | Sbjct 1119 TCAAAGCGAAGATTCTAGAGCGAATGGCAGAGTGGACCGAGATGTTCTCCAGCGACCCGG 1060 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTG-TGATCAA 125 | || || |||||| || || ||||||| ||||||||| || ||| || || ||| Sbjct 1059 ACCTAGGGATCATGCAGGGAGCTTATATGAAGCTTAAGACCCAGAGTATGTCATGTTCAC 1000 Query 126 CTCTGGT---TCGTTGGGAG---CACTGA--CCAACGTGTT--------GTAGACCCTAA 169 | | | || ||| | ||| || |||| || | |||||| Sbjct 999 CACAGACAAGTCTTTGATATTCCCAC-GATTCCAAGAGCTTACAATAATGCAGACCCATC 941 Query 170 CCTGCGACCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGA 229 || |||||||| || || || ||||||||||| ||||| || ||||| ||||| || Sbjct 940 GCTTCGACCTCCATCAAAGCCACAGAAGACCCAAATCACCGATATCGACCGTCAGAAAGA 881 Query 230 AGAGGAGGAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGA--AAGCGGGA-CCGAGCC 286 || || || || |||||||| || || |||||| ||| || |||| ||| || Sbjct 880 GGAAGACGAACTCCAGATGGCCCTCGCTCTCTCCATCAGAGACAAAGCCCCCGCCGCTCC 821 Query 287 ATCCGCCGCCAGGTCCAACCAGCCGCAAGCAAA----------AGCCCCACAACAATCCG 336 || || || | ||||| || || |||| ||| || || | || Sbjct 820 GTCAGCTGCGAAATCCAATCAACCCACAGCAGCTGGTGCTTCGAGCGCCTCAC--AGCCT 763 Query 337 CCCCGGAACAAGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCC 396 | |||| |||| | ||| | || |||| || || ||||| || |||||||||| Sbjct 762 AC-----ACAACAGCAACCACAACCCGTTCCATCCGGCACAACAGCTGCGACCGTCTCCC 708 Query 397 GCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAG 456 |||| || || || | ||||||| |||||| || ||||| ||| || ||||| || | Sbjct 707 GCGTCCGAGCACTCTTCGACTTCCAGCCCTCTGAGCCCGGTGAGCTGCAGTTCCGGAAGG 648 Query 457 GCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTG 516 |||||||||| ||||| ||||| ||||| || || || |||||||| || || ||||| | Sbjct 647 GCGACATTATAGCGGTGCTCGAATCTGTTTATAAAGATTGGTGGAAAGGGTCGCTGCGAG 588 Query 517 GACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGG 576 | |||||||| |||||||| || || ||||| ||||| |||||||| || || || |||| Sbjct 587 GGCAGACCGGTATCTTCCCGCTAAATTATGTGGAGAAACTGCAGGACCCCACAAAAGAGG 528 Query 577 AGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGA 636 | | || || || || || |||||||||||||| ||||| ||||||| ||| ||||||| Sbjct 527 AATTAGAAAGGGAGGCACATATGGAGGCGGAAGTATTTGCTGAGATCAGGAATGTGGAGA 468 Query 637 AGCTGCTAGCTCTGCTGAGCACTAGTTCGAG---------TGCCGACGCTAGGGACAATG 687 | | || || ||| ||||||| || ||||| | ||| | |||||| |||| Sbjct 467 AATTACTTGCCCTGTTGAGCACAAGCTCGAGAACCGGAGAAGGCGATGTTAGGGATAATG 408 Query 688 AGGAGATCAC 697 | ||||| || Sbjct 407 AAGAGATTAC 398 Score = 114 bits (126), Expect = 4e-22 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 823 AGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCT 882 ||| || ||||| |||||||| ||||||||||| || ||||||||||||||| | || Sbjct 202 AGACGACTTCACCTCCCTCAACGAAAAGTTCATCAAAGCCCGCCGCGACTACGAATCGCT 143 Query 883 CCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCGTCAACCCTATGGCTA 942 ||| |||||||| ||||||||||| |||| || |||||| || | ||||| |||| Sbjct 142 CCTAGAAGCCTCAATGTCGCAACCCCCGCAACCAACCTACGGCCGCCCCCCCTACAGCTA 83 Query 943 CGGCGC 948 |||||| Sbjct 82 CGGCGC 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945123874350