Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq6 158 4e-35 >seq6 Length=852978 Score = 158 bits (174), Expect = 4e-35 Identities = 208/286 (73%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || || || || || || || || || || || | ||||||| | | || || Sbjct 371015 GGCACTACGGCCGCGACGGTGTCTCGGGTGCGGGCGCTGTTCGACTTCGTGGCGTCAGAG 370956 Query 432 CCCGGCGAGTTGG-CTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAA 490 || | |||| ||| |||| | || | |||||| |||||||| ||||| || |||||| Sbjct 370955 CCGGACGAGCTGGACTTTAAG-AAGGACGACATCATTGCGGTGCTCGAATCGGTGTACCG 370897 Query 491 GGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGA 550 || |||||| || || ||| || | || ||||||||||| |||||||| || || Sbjct 370896 TGATTGGTGGCGCGGATCGCTGAAGGGCCGCACGGGCATCTTCCCGCTCAACTACGTGGA 370837 Query 551 GAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGT 610 | |||| ||| || || || ||||| || | || || |||||||| || || || Sbjct 370836 AATCCTGCCGGACCCAACACCCGACGAGCTGCAGCGCGAGGCCCAGATGGAAGCCGAGGT 370777 Query 611 CTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 ||||| |||||||||||||| ||||||||||| | ||||||||| Sbjct 370776 GTTTGCCGAGATCAAGAACGTCGAGAAGCTGCTGACGCTGCTGAGC 370731 Score = 87.8 bits (96), Expect = 6e-14 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 |||| || ||||||||||||||||| |||||||||||||| |||||||| ||||| ||| Sbjct 370473 CAGACGACTTCACGCAGCTCAACGAAAAGTTCATCAAGGCGCGCCGCGATTACGAGGCCC 370414 Query 882 TCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922 | || || | || ||| | || || ||| |||| |||| Sbjct 370413 TGCTGGAGTCGTCCATGGCCCACCCGCCGCTGCCCAACTAC 370373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945586047600