Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20moniliformis_20[genbank_20GCA_5F000712465.1_202014-06- 26] 365 sequences; 25,429,610 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3 168 2e-38 >seq3 Length=499496 Score = 168 bits (186), Expect = 2e-38 Identities = 205/279 (73%), Gaps = 3/279 (1%) Strand=Plus/Minus Query 366 GCATCT---GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACG 422 |||||| |||||||| || || || || ||||| ||||| || | ||||| || Sbjct 46368 GCATCTCGGGGAACCACGGCTGCGACGGTGTCCCGTGTTCGTGCAATCTACGATTTTGTT 46309 Query 423 CCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCT 482 || || ||| || || ||| || || || ||| | ||||||||| | |||||| Sbjct 46308 CCTTCTGAAGAAGGTGAACTGGAGTTTAAGAAGGGTGACGTCATTGCGGTTTTAGAGTCT 46249 Query 483 GTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAAC 542 || | ||||||||||||| || ||||| ||||| ||||| || || ||||| | || Sbjct 46248 GTTTTCAAGGACTGGTGGCGTGGGTCTCTACGTGGGCAGACGGGAATTTTCCCGTTGAAT 46189 Query 543 TATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAG 602 ||||| |||||| || ||||||||| || ||| | || | ||||||||||||||| Sbjct 46188 TATGTGGAGAAGTTGACGGATCCTACACCTGATGAGATTAAGCGGGAAGCTCAGATGGAG 46129 Query 603 GCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTG 641 || || || ||||| ||||| ||||| ||||||||| || Sbjct 46128 GCTGAGGTTTTTGCCGAGATTAAGAATGTGGAGAAGTTG 46090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945536342175