Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20omanensis_20[genbank_20GCA_5F000833645.1_202015-02-09] 6,542 sequences; 31,125,221 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq5737 176 1e-40 >seq5737 Length=6893 Score = 176 bits (194), Expect = 1e-40 Identities = 211/287 (74%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || || || || || || || || || || |||||||||| || || || Sbjct 1193 GGCACTACTGCTGCAACGGTATCACGTGTACGTGCGATTTACGACTTTGTCCCTTCTGAG 1134 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||| ||| || || || ||| | ||||||||| | ||||| || |||||| Sbjct 1133 GAGGGCGAACTGGAGTTTAAGAAGGGTGACGTCATTGCGGTTTTGGAGTCGGTTTACAAG 1074 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || ||||| ||||||||||| || || ||||| | || ||||||||| Sbjct 1073 GACTGGTGGCGTGGGTCTCTCCGTGGACAGACGGGTATTTTCCCGTTGAATTATGTCGAG 1014 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||| || ||||||||| || ||| | || | ||||| |||||||||||||| || Sbjct 1013 AAGTTGACGGATCCTACACCTGAAGAGATTAAGCGGGAAGCGCAGATGGAGGCGGAGGTT 954 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||||||||||| ||||| ||||||||| || | | ||| |||| || Sbjct 953 TTTGCGGAGATTAAGAATGTGGAGAAGTTGTTGACGCTGTTGAGTAC 907 Score = 116 bits (128), Expect = 1e-22 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 520 AGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGC 579 |||| || |||||||| | || |||||||||||| || ||||||||| || ||| Sbjct 682 AGACGGGTATCTTCCCGTTGAATTATGTCGAGAAGTTGACGGATCCTACACCTGAAGAGA 623 Query 580 TCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGC 639 | || | ||||| |||||||||||||| || ||||||||||| ||||| ||||||||| Sbjct 622 TTAAGCGGGAAGCGCAGATGGAGGCGGAGGTTTTTGCGGAGATTAAGAATGTGGAGAAGT 563 Query 640 TGCTAGCTCTGCTGAGCAC 658 || | | ||| ||||||| Sbjct 562 TGTTGACACTGTTGAGCAC 544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944459042490