Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Huntiella_20savannae_20[genbank_20GCA_5F001483325.1_202015-12-30] 361 sequences; 28,542,441 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq97 167 7e-38 >seq97 Length=95106 Score = 167 bits (184), Expect = 7e-38 Identities = 209/287 (73%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || || || || || || || || || || | |||||||| || || || Sbjct 66349 GGCACTACTGCTGCAACGGTATCACGTGTCCGTGCGATCTACGACTTTGTCCCTTCTGAG 66408 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||| ||| || || || ||| | ||||||||| | ||||| || |||||| Sbjct 66409 GAGGGCGAACTGGAGTTTAAGAAGGGTGACGTCATTGCGGTTTTGGAGTCGGTTTACAAG 66468 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || ||||| ||||||||||| || |||||||| | || ||||||||| Sbjct 66469 GACTGGTGGCGTGGGTCTCTTCGTGGACAGACGGGTATCTTCCCGTTGAATTATGTCGAG 66528 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||| || ||| ||||| || ||| | || | ||||| ||||||||||| || || Sbjct 66529 AAGTTGACGGACCCTACACCTGAAGAGATTAAGCGGGAAGCGCAGATGGAGGCCGAGGTT 66588 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||||||||||| ||||| ||||||||| || | | ||| |||| || Sbjct 66589 TTTGCGGAGATTAAGAATGTGGAGAAGTTGTTGACGCTGTTGAGTAC 66635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945537039795