Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq113 179 1e-41 >seq113 Length=606178 Score = 179 bits (198), Expect = 1e-41 Identities = 216/291 (74%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || || || || || ||||||||||| || |||| ||| ||| | | Sbjct 476078 TCGGGGACAACTGCTGCAACAGTATCCCGCGTTCGGGCGCTTTTCGATTTCCAGGCTAGC 476137 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 ||||||| ||||| ||||| || || || || |||||||||||||| ||||| | Sbjct 476138 GAACCCGAGGAGTTAAGCTTCCGAAAGGGAGATATCATTGCGGTTCTCGAATCTGTATTT 476197 Query 489 AAGGACTGGTGGAAGGG-TTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547 ||||| ||||||||||| |||| || | || || ||||| || || || | || ||||| Sbjct 476198 AAGGATTGGTGGAAGGGCTTCT-TGAGGGGTCAAACCGGAATTTTTCCTTTAAATTATGT 476256 Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607 ||||| || |||||||| || || || ||||||| ||||||||||| || Sbjct 476257 GGAGAAATTGGCAGATCCTACACCAGAAGAACTACAGAGAGAGGCTCAGATGGAACAAGA 476316 Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||||||||||||||||||||| || |||||||| || || || | ||||| Sbjct 476317 AGTCTTTGCGGAGATCAAGAATGTTGAGAAGCTTCTTACTTTGTTAAGCAC 476367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945512099880