Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq91 167 7e-38
>seq91
Length=173088
Score = 167 bits (184), Expect = 7e-38
Identities = 213/291 (73%), Gaps = 2/291 (1%)
Strand=Plus/Plus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || || || || || || ||||||||||| || |||| ||| ||| | |
Sbjct 69445 TCCGGGACAACTGCTGCAACGGTATCCCGCGTTCGGGCGCTTTTCGATTTCCAGGCTAGC 69504
Query 429 GAACCCGGCGAGTTG-GCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487
||||||| |||||| ||||| || || || || || ||||| |||||||| ||||| |
Sbjct 69505 GAACCCGAAGAGTTGAGCTTT-CGAAAGGGAGATATCATTGCAGTTCTCGAATCTGTATT 69563
Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547
|||||| ||||||||||||| || | || || ||||| || || || || || |||||
Sbjct 69564 CAAGGATTGGTGGAAGGGTTTCTTGAGGGGCCAAACCGGAATTTTTCCTCTAAATTATGT 69623
Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607
||||| ||| || ||||| || || | ||||||| || |||||||| ||
Sbjct 69624 GGAGAAACTGGCAGACCCTACACCAGAAGAATTACAGAGAGAGGCGCAGATGGAACAAGA 69683
Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
|||||||||||||| || || || |||||||| || || || | |||||
Sbjct 69684 GGTCTTTGCGGAGATAAAAAATGTCGAGAAGCTTCTTACTTTGTTAAGCAC 69734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945301069830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |