Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10- 27] 1,714 sequences; 68,152,485 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq91 167 7e-38 >seq91 Length=173088 Score = 167 bits (184), Expect = 7e-38 Identities = 213/291 (73%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || || || || || ||||||||||| || |||| ||| ||| | | Sbjct 69445 TCCGGGACAACTGCTGCAACGGTATCCCGCGTTCGGGCGCTTTTCGATTTCCAGGCTAGC 69504 Query 429 GAACCCGGCGAGTTG-GCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487 ||||||| |||||| ||||| || || || || || ||||| |||||||| ||||| | Sbjct 69505 GAACCCGAAGAGTTGAGCTTT-CGAAAGGGAGATATCATTGCAGTTCTCGAATCTGTATT 69563 Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547 |||||| ||||||||||||| || | || || ||||| || || || || || ||||| Sbjct 69564 CAAGGATTGGTGGAAGGGTTTCTTGAGGGGCCAAACCGGAATTTTTCCTCTAAATTATGT 69623 Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607 ||||| ||| || ||||| || || | ||||||| || |||||||| || Sbjct 69624 GGAGAAACTGGCAGACCCTACACCAGAAGAATTACAGAGAGAGGCGCAGATGGAACAAGA 69683 Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 |||||||||||||| || || || |||||||| || || || | ||||| Sbjct 69684 GGTCTTTGCGGAGATAAAAAATGTCGAGAAGCTTCTTACTTTGTTAAGCAC 69734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945301069830