Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq32 205 3e-49 >seq32 Length=123713 Score = 205 bits (226), Expect = 3e-49 Identities = 225/294 (77%), Gaps = 4/294 (1%) Strand=Plus/Minus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 |||| || || || || || || || || || ||||| ||||| | |||||| | | Sbjct 91495 CATCAGGGACGACTGCTGCCACAGTTTCTCGTGTTCGAGCCCTGTTTGACTTCCAGGCGA 91436 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 | || || | |||||| | ||||| ||||| |||||||||||||| || ||||| |||| Sbjct 91435 CTGATCCAGATGAGTTGACGTTCCGAAAAGGTGACATTATTGCGGTACTGGAGTCCGTGT 91376 Query 487 ACAAGGACTGGTGGAAGGG-TTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTAT 545 | |||||||||||||| || |||| || | || ||||| || |||||||| | ||||| Sbjct 91375 ATAAGGACTGGTGGAAAGGCTTCT-TGAGAGGGCAGACTGGTATCTTCCCGTTGAACTAC 91317 Query 546 GTCGAGAAGCT-GCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGC 604 || || ||||| |||| ||||||| || ||||| ||||||||||||| ||||| || Sbjct 91316 GTGGAAAAGCTAGCAG-ATCCTACTGCAGAAGAGCTACAGAGAGAAGCTCAAATGGAAGC 91258 Query 605 GGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 || ||||| || ||||||||||| || || ||||| || || |||| ||||| Sbjct 91257 AGAGGTCTTCGCAGAGATCAAGAATGTTGAAAAGCTTCTTACTTTGCTAAGCAC 91204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945438675375