Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1155 170 6e-39 >seq1155 Length=12426 Score = 170 bits (188), Expect = 6e-39 Identities = 205/276 (74%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 ||||| || || || || || || || ||||| ||||| |||| ||| ||| | || | Sbjct 7254 TCTGGGACAACTGCTGCCACAGTTTCACGCGTCCGCGCACTTTTCGATTTC-CAAGCTAG 7196 Query 429 -GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487 ||||| | |||||| ||| || || || || || ||||| |||||||| ||||| | Sbjct 7195 CGAACCGGAAGAGTTGAGTTTTCGAAAGGGAGATATCATTGCAGTTCTCGAATCTGTATT 7136 Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547 |||||| ||||||||||||| || | || || ||||| |||||||| || || ||||| Sbjct 7135 CAAGGATTGGTGGAAGGGTTTCTTGAGGGGCCAAACCGGAATCTTCCCTCTAAATTATGT 7076 Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607 ||||| || |||||||| || || | ||||||| ||||||||||| || Sbjct 7075 GGAGAAATTGGCAGATCCTACACCAGAAGAATTACAGAGAGAGGCTCAGATGGAACAAGA 7016 Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCT 643 |||||||||||||| || || || |||||||| || Sbjct 7015 GGTCTTTGCGGAGATAAAAAATGTTGAGAAGCTTCT 6980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15943899725655