Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1155 170 6e-39
>seq1155
Length=12426
Score = 170 bits (188), Expect = 6e-39
Identities = 205/276 (74%), Gaps = 2/276 (1%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
||||| || || || || || || || ||||| ||||| |||| ||| ||| | || |
Sbjct 7254 TCTGGGACAACTGCTGCCACAGTTTCACGCGTCCGCGCACTTTTCGATTTC-CAAGCTAG 7196
Query 429 -GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487
||||| | |||||| ||| || || || || || ||||| |||||||| ||||| |
Sbjct 7195 CGAACCGGAAGAGTTGAGTTTTCGAAAGGGAGATATCATTGCAGTTCTCGAATCTGTATT 7136
Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547
|||||| ||||||||||||| || | || || ||||| |||||||| || || |||||
Sbjct 7135 CAAGGATTGGTGGAAGGGTTTCTTGAGGGGCCAAACCGGAATCTTCCCTCTAAATTATGT 7076
Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607
||||| || |||||||| || || | ||||||| ||||||||||| ||
Sbjct 7075 GGAGAAATTGGCAGATCCTACACCAGAAGAATTACAGAGAGAGGCTCAGATGGAACAAGA 7016
Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCT 643
|||||||||||||| || || || |||||||| ||
Sbjct 7015 GGTCTTTGCGGAGATAAAAAATGTTGAGAAGCTTCT 6980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15943899725655
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |