Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2336 149 2e-32 >seq2336 Length=136884 Score = 149 bits (164), Expect = 2e-32 Identities = 200/276 (72%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 ||||| || || || || || || || ||||| ||||| |||| || ||| | || | Sbjct 37243 TCTGGGACAACTGCTGCCACAGTTTCTCGCGTCCGCGCACTTTTTGATTTC-CAAGCTAG 37185 Query 429 -GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487 ||||| | |||||| ||| || || || || || ||||| ||||| || ||||||| Sbjct 37184 CGAACCGGAAGAGTTGAGTTTTCGAAAGGGGGATATCATTGCAGTTCTTGAATCTGTGTT 37125 Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547 ||||| |||||||| |||| || | || || ||||| ||||| || ||||| ||||| Sbjct 37124 TAAGGATTGGTGGAAAGGTTTCTTGAGGGGCCAAACCGGAATCTTTCCTCTCAATTATGT 37065 Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607 ||||| || |||||||| || || | ||||||| || |||||||| || Sbjct 37064 GGAGAAATTGGCAGATCCTACACCAGAAGAATTGCAGAGAGAGGCCCAGATGGAACAAGA 37005 Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCT 643 |||||||||||||| || || || ||||| || || Sbjct 37004 GGTCTTTGCGGAGATTAAAAATGTTGAGAAACTTCT 36969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945148116645