Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2336 149 2e-32
>seq2336
Length=136884
Score = 149 bits (164), Expect = 2e-32
Identities = 200/276 (72%), Gaps = 2/276 (1%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
||||| || || || || || || || ||||| ||||| |||| || ||| | || |
Sbjct 37243 TCTGGGACAACTGCTGCCACAGTTTCTCGCGTCCGCGCACTTTTTGATTTC-CAAGCTAG 37185
Query 429 -GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487
||||| | |||||| ||| || || || || || ||||| ||||| || |||||||
Sbjct 37184 CGAACCGGAAGAGTTGAGTTTTCGAAAGGGGGATATCATTGCAGTTCTTGAATCTGTGTT 37125
Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547
||||| |||||||| |||| || | || || ||||| ||||| || ||||| |||||
Sbjct 37124 TAAGGATTGGTGGAAAGGTTTCTTGAGGGGCCAAACCGGAATCTTTCCTCTCAATTATGT 37065
Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607
||||| || |||||||| || || | ||||||| || |||||||| ||
Sbjct 37064 GGAGAAATTGGCAGATCCTACACCAGAAGAATTGCAGAGAGAGGCCCAGATGGAACAAGA 37005
Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCT 643
|||||||||||||| || || || ||||| || ||
Sbjct 37004 GGTCTTTGCGGAGATTAAAAATGTTGAGAAACTTCT 36969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945148116645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |