Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq190 170 6e-39 >seq190 Length=15204 Score = 170 bits (188), Expect = 6e-39 Identities = 211/289 (73%), Gaps = 0/289 (0%) Strand=Plus/Plus Query 370 CTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGG 429 |||| || ||||| || ||||| || || || ||||| || ||||| || |||| || | Sbjct 11604 CTGGCACAACAGCCGCCACCGTATCTCGAGTCCGCGCTCTATACGATTTTGCGCCGTCCG 11663 Query 430 AACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACA 489 |||| || ||| ||| ||| || ||||| ||||| || || |||||||| || |||| Sbjct 11664 AACCTGGAGAGCTGGAGTTCAAGAAGGGCGATATTATAGCCGTCCTCGAGTCCGTTTACA 11723 Query 490 AGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCG 549 ||||||||||| || || | || ||| || || ||||| || || ||||||| Sbjct 11724 AGGACTGGTGGCGAGGCTCGTTAAAGGGCAGGACTGGAATTTTCCCTCTGAATTATGTCG 11783 Query 550 AGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAG 609 ||||||| |||||| || || || || | ||||||| |||||||| || || | Sbjct 11784 AGAAGCTTGCGGATCCGACACCTGATGAACTTCAACGAGAAGCACAGATGGAAGCCGAGG 11843 Query 610 TCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 | ||||| || |||||||| || |||||||| | | ||| ||||||| Sbjct 11844 TGTTTGCCGAAATCAAGAATGTAGAGAAGCTATTGACCCTGTTGAGCAC 11892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945443209905