Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq18 181 3e-42 >seq18 Length=662604 Score = 181 bits (200), Expect = 3e-42 Identities = 238/326 (73%), Gaps = 3/326 (1%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || || || || || ||||| || || ||||||||||| ||||| ||| || || ||| Sbjct 580519 GGTACGACCGCCGCCACCGTATCGCGAGTTCGCGCCCTATACGATTTCGTACCATCCGAA 580460 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||||||| | | || || || ||||| || || || || ||||| || |||||| Sbjct 580459 CCCGGCGAGCTCGAGTTTAAGAAGGGGGACATCATAGCCGTCCTTGAGTCCGTCTACAAG 580400 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||| || || || || ||| ||||| || || || ||||| |||||| Sbjct 580399 GATTGGTGGCGAGGCTCGTTGAAGGGCAGGACTGGCATTTTTCCTCTGAACTACGTCGAG 580340 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||||| ||| || ||| || ||||| | | || || ||||||||||| || || Sbjct 580339 AAGCTTGCGGACCCGACCCCTGATGAGCTTCAACGCGAGGCGCAGATGGAGGCAGAGGTG 580280 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC-TAGTTCG-AGTG 669 ||||| |||||||||||||||||||||||||| |||| ||||||| | || | | Sbjct 580279 TTTGCCGAGATCAAGAACGTGGAGAAGCTGCTTACTCTATTGAGCACATCCAACGCATCG 580220 Query 670 CCGACGCTAG-GGACAATGAGGAGAT 694 |||| | || ||| ||||||||||| Sbjct 580219 CCGAGGGAAGAGGATAATGAGGAGAT 580194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945470068275