Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12-
21] 3,253 sequences; 60,403,714 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq8 221 4e-54
>seq8
Length=1068389
Score = 221 bits (244), Expect = 4e-54
Identities = 221/287 (77%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
||||||||||| || || ||| ||| || || ||||| | |||||| | ||||||||
Sbjct 1030597 GGAACCACAGCTGCCACAGTCAGCCGAGTCCGAGCCCTGTTCGACTTTGCCCCCTCGGAG 1030656
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
||||| || | | ||| || |||||| | ||||| ||||||||| || ||||||
Sbjct 1030657 CCCGGTGAACTTGAATTCAAGAAGGGCGACGTCATTGCCGTTCTCGAGAGCGTTTACAAG 1030716
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| || || || || || ||||||||||||| || |||||||| || |||
Sbjct 1030717 GACTGGTGGCGAGGCTCCCTCCGGGGCAAGACCGGCATCTTTCCTCTCAACTACGTTGAG 1030776
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
|||||| || || || ||| ||||| || | || || ||||||||||| || |||
Sbjct 1030777 AAGCTGACCGACCCAACACCGGATGAGCTGCAGCGTGAGGCCCAGATGGAGGCCGAGGTC 1030836
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
|||||||||||||||||||| |||||||| | |||||||||||||
Sbjct 1030837 TTTGCGGAGATCAAGAACGTCGAGAAGCTATTGACTCTGCTGAGCAC 1030883
Score = 93.3 bits (102), Expect = 1e-15
Identities = 157/224 (70%), Gaps = 9/224 (4%)
Strand=Plus/Plus
Query 701 GCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTC 760
||| || ||| | || || | || || |||||| ||||| || | |||| ||||||||
Sbjct 1030987 GCTCTATCACCAAACGTTGGCCATCCGACCGAAGCTGATCAAGTTGATTGAGAAGTATTC 1031046
Query 761 GCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTG-TGTGTTGGCCACTGATCGTGT 819
||| ||||||||| ||| || | | || || | |||| || | ||
Sbjct 1031047 GCAGAAGAAGGGTGAGT---ATATGT---GCTCCTTCGCTGTGCGAACCCACGCTCACAG 1031100
Query 820 TCCA--GATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAA 877
||| ||||| ||||| ||||| || || ||||||||||| || || || || ||||||
Sbjct 1031101 ACCATAGATGACTTCACCCAGCTTAATGAAAAGTTCATCAAAGCTCGACGGGATTACGAA 1031160
Query 878 ACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTA 921
|||||||||| |||| ||| | || ||| | |||| | ||||
Sbjct 1031161 GCCCTCCTTGAGTCCTCTATGGCCCACCCACCCCAGCACAGCTA 1031204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945032660535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |