Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ilyonectria_20destructans_20[genbank_20GCA_5F001913115.1_202016-12- 21] 3,253 sequences; 60,403,714 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq8 221 4e-54 >seq8 Length=1068389 Score = 221 bits (244), Expect = 4e-54 Identities = 221/287 (77%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 ||||||||||| || || ||| ||| || || ||||| | |||||| | |||||||| Sbjct 1030597 GGAACCACAGCTGCCACAGTCAGCCGAGTCCGAGCCCTGTTCGACTTTGCCCCCTCGGAG 1030656 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||| || | | ||| || |||||| | ||||| ||||||||| || |||||| Sbjct 1030657 CCCGGTGAACTTGAATTCAAGAAGGGCGACGTCATTGCCGTTCTCGAGAGCGTTTACAAG 1030716 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || || || || || ||||||||||||| || |||||||| || ||| Sbjct 1030717 GACTGGTGGCGAGGCTCCCTCCGGGGCAAGACCGGCATCTTTCCTCTCAACTACGTTGAG 1030776 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||| || || || ||| ||||| || | || || ||||||||||| || ||| Sbjct 1030777 AAGCTGACCGACCCAACACCGGATGAGCTGCAGCGTGAGGCCCAGATGGAGGCCGAGGTC 1030836 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct 1030837 TTTGCGGAGATCAAGAACGTCGAGAAGCTATTGACTCTGCTGAGCAC 1030883 Score = 93.3 bits (102), Expect = 1e-15 Identities = 157/224 (70%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 701 GCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTC 760 ||| || ||| | || || | || || |||||| ||||| || | |||| |||||||| Sbjct 1030987 GCTCTATCACCAAACGTTGGCCATCCGACCGAAGCTGATCAAGTTGATTGAGAAGTATTC 1031046 Query 761 GCAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTG-TGTGTTGGCCACTGATCGTGT 819 ||| ||||||||| ||| || | | || || | |||| || | || Sbjct 1031047 GCAGAAGAAGGGTGAGT---ATATGT---GCTCCTTCGCTGTGCGAACCCACGCTCACAG 1031100 Query 820 TCCA--GATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAA 877 ||| ||||| ||||| ||||| || || ||||||||||| || || || || |||||| Sbjct 1031101 ACCATAGATGACTTCACCCAGCTTAATGAAAAGTTCATCAAAGCTCGACGGGATTACGAA 1031160 Query 878 ACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTA 921 |||||||||| |||| ||| | || ||| | |||| | |||| Sbjct 1031161 GCCCTCCTTGAGTCCTCTATGGCCCACCCACCCCAGCACAGCTA 1031204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945032660535