Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11] 29 sequences; 35,537,816 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq6 221 4e-54 >seq6 Length=318833 Score = 221 bits (244), Expect = 4e-54 Identities = 221/287 (77%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || ||||| || || || || || ||||| ||||| || |||||||| ||| ||||| Sbjct 254080 GGCACCACTGCCGCCACGGTGTCGCGCGTCCGCGCGCTGTACGACTTTGTGCCGTCGGAG 254021 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||||||| ||| |||| ||| ||||| || || || || || ||||| ||||||||| Sbjct 254020 CCCGGCGAGCTGGAGTTCCACAAGGGCGATATCATCGCCGTGCTAGAGTCGGTGTACAAG 253961 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || ||| || |||||||||| ||||| |||||||| |||||| Sbjct 253960 GACTGGTGGCGCGGCCTGCTGAAGGGCAAGACCGGCATTTTCCCGCTCAACTACGTCGAG 253901 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||| ||||| || ||| ||||| || | || ||| |||||||||| || || Sbjct 253900 AAGCTGTCCGATCCGACGCCGGACGAGCTGCAGCGCGAGGCTGAGATGGAGGCCGAGGTG 253841 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||||| ||||| |||||||| ||||||||| | | ||||||||||| Sbjct 253840 TTTGCCGAGATTAAGAACGTCGAGAAGCTGTTGACGCTGCTGAGCAC 253794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945594942255