Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq6 221 4e-54
>seq6
Length=318833
Score = 221 bits (244), Expect = 4e-54
Identities = 221/287 (77%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| ||||| || || || || || ||||| ||||| || |||||||| ||| |||||
Sbjct 254080 GGCACCACTGCCGCCACGGTGTCGCGCGTCCGCGCGCTGTACGACTTTGTGCCGTCGGAG 254021
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
||||||||| ||| |||| ||| ||||| || || || || || ||||| |||||||||
Sbjct 254020 CCCGGCGAGCTGGAGTTCCACAAGGGCGATATCATCGCCGTGCTAGAGTCGGTGTACAAG 253961
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| || ||| || |||||||||| ||||| |||||||| ||||||
Sbjct 253960 GACTGGTGGCGCGGCCTGCTGAAGGGCAAGACCGGCATTTTCCCGCTCAACTACGTCGAG 253901
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
|||||| ||||| || ||| ||||| || | || ||| |||||||||| || ||
Sbjct 253900 AAGCTGTCCGATCCGACGCCGGACGAGCTGCAGCGCGAGGCTGAGATGGAGGCCGAGGTG 253841
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
||||| ||||| |||||||| ||||||||| | | |||||||||||
Sbjct 253840 TTTGCCGAGATTAAGAACGTCGAGAAGCTGTTGACGCTGCTGAGCAC 253794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945594942255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |